Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.21■□□□□ 0.51
NPAS4Q8IUM7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
NPAS4Q8IUM7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS4Q8IUM7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS4Q8IUM7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS4Q8IUM7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
NPAS4Q8IUM7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.2■□□□□ 0.5
NPAS4Q8IUM7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.2■□□□□ 0.5
NPAS4Q8IUM7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS4Q8IUM7 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
NPAS4Q8IUM7 AC015922.1-201ENST00000421102 1152 ntBASIC18.2■□□□□ 0.5
NPAS4Q8IUM7 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.2■□□□□ 0.5
NPAS4Q8IUM7 FAM207CP-201ENST00000443486 507 ntBASIC18.2■□□□□ 0.5
NPAS4Q8IUM7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS4Q8IUM7 UGT1A2P-201ENST00000454886 866 ntBASIC18.2■□□□□ 0.5
NPAS4Q8IUM7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.2■□□□□ 0.5
NPAS4Q8IUM7 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.2■□□□□ 0.5
NPAS4Q8IUM7 AC069120.2-201ENST00000524091 540 ntBASIC18.2■□□□□ 0.5
NPAS4Q8IUM7 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
NPAS4Q8IUM7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.2■□□□□ 0.5
NPAS4Q8IUM7 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.2■□□□□ 0.5
NPAS4Q8IUM7 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.2■□□□□ 0.5
NPAS4Q8IUM7 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.2■□□□□ 0.5
NPAS4Q8IUM7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NPAS4Q8IUM7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.2■□□□□ 0.5
NPAS4Q8IUM7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
NPAS4Q8IUM7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NPAS4Q8IUM7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 AC016027.1-202ENST00000607927 1699 ntBASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 MIR661-201ENST00000384842 89 ntBASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NPAS4Q8IUM7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
NPAS4Q8IUM7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NPAS4Q8IUM7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NPAS4Q8IUM7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPAS4Q8IUM7 AC016396.2-201ENST00000562575 1417 ntBASIC18.18■□□□□ 0.5
NPAS4Q8IUM7 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.18■□□□□ 0.5
NPAS4Q8IUM7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPAS4Q8IUM7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPAS4Q8IUM7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NPAS4Q8IUM7 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.18■□□□□ 0.5
NPAS4Q8IUM7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.18■□□□□ 0.5
NPAS4Q8IUM7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NPAS4Q8IUM7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.18■□□□□ 0.5
NPAS4Q8IUM7 AL512638.1-201ENST00000457493 794 ntBASIC18.18■□□□□ 0.5
NPAS4Q8IUM7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NPAS4Q8IUM7 MPDU1-223ENST00000582151 728 ntBASIC18.18■□□□□ 0.5
NPAS4Q8IUM7 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NPAS4Q8IUM7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPAS4Q8IUM7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPAS4Q8IUM7 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NPAS4Q8IUM7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPAS4Q8IUM7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.18■□□□□ 0.5
NPAS4Q8IUM7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.18■□□□□ 0.5
NPAS4Q8IUM7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPAS4Q8IUM7 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPAS4Q8IUM7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NPAS4Q8IUM7 AC131009.4-201ENST00000624048 1740 ntBASIC18.18■□□□□ 0.5
NPAS4Q8IUM7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.17■□□□□ 0.5
NPAS4Q8IUM7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPAS4Q8IUM7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPAS4Q8IUM7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPAS4Q8IUM7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NPAS4Q8IUM7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPAS4Q8IUM7 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
NPAS4Q8IUM7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NPAS4Q8IUM7 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms