Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB43Q86YS6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
RAB43Q86YS6 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
RAB43Q86YS6 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB43Q86YS6 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB43Q86YS6 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB43Q86YS6 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB43Q86YS6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB43Q86YS6 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB43Q86YS6 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB43Q86YS6 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB43Q86YS6 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RAB43Q86YS6 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RAB43Q86YS6 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.4■□□□□ 0.22
RAB43Q86YS6 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB43Q86YS6 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB43Q86YS6 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RAB43Q86YS6 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RAB43Q86YS6 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
RAB43Q86YS6 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB43Q86YS6 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB43Q86YS6 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.39■□□□□ 0.21
RAB43Q86YS6 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB43Q86YS6 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB43Q86YS6 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB43Q86YS6 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB43Q86YS6 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB43Q86YS6 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB43Q86YS6 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB43Q86YS6 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.39■□□□□ 0.21
RAB43Q86YS6 AC004817.3-201ENST00000602957 2129 ntBASIC16.39■□□□□ 0.21
RAB43Q86YS6 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB43Q86YS6 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB43Q86YS6 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB43Q86YS6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB43Q86YS6 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.39■□□□□ 0.21
RAB43Q86YS6 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB43Q86YS6 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB43Q86YS6 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB43Q86YS6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RAB43Q86YS6 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.39■□□□□ 0.21
RAB43Q86YS6 AC007967.2-201ENST00000432613 625 ntBASIC16.39■□□□□ 0.21
RAB43Q86YS6 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB43Q86YS6 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB43Q86YS6 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.39■□□□□ 0.21
RAB43Q86YS6 MIR3687-2-201ENST00000577708 61 ntBASIC16.39■□□□□ 0.21
RAB43Q86YS6 MIR3687-1-201ENST00000614492 61 ntBASIC16.39■□□□□ 0.21
RAB43Q86YS6 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB43Q86YS6 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB43Q86YS6 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB43Q86YS6 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB43Q86YS6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB43Q86YS6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB43Q86YS6 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RAB43Q86YS6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB43Q86YS6 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.39■□□□□ 0.21
RAB43Q86YS6 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RAB43Q86YS6 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB43Q86YS6 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB43Q86YS6 AL049757.1-201ENST00000616842 1596 ntBASIC16.38■□□□□ 0.21
RAB43Q86YS6 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB43Q86YS6 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB43Q86YS6 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB43Q86YS6 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB43Q86YS6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.38■□□□□ 0.21
RAB43Q86YS6 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB43Q86YS6 AC011676.5-201ENST00000624864 2660 ntBASIC16.38■□□□□ 0.21
RAB43Q86YS6 AC093677.2-201ENST00000600169 1863 ntBASIC16.38■□□□□ 0.21
RAB43Q86YS6 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB43Q86YS6 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB43Q86YS6 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB43Q86YS6 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB43Q86YS6 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
RAB43Q86YS6 AC073621.1-201ENST00000392730 636 ntBASIC16.38■□□□□ 0.21
RAB43Q86YS6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB43Q86YS6 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
RAB43Q86YS6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.38■□□□□ 0.21
RAB43Q86YS6 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.38■□□□□ 0.21
RAB43Q86YS6 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB43Q86YS6 AC002347.1-201ENST00000569543 541 ntBASIC16.38■□□□□ 0.21
RAB43Q86YS6 AC109462.3-201ENST00000573934 613 ntBASIC16.38■□□□□ 0.21
RAB43Q86YS6 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.38■□□□□ 0.21
RAB43Q86YS6 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.38■□□□□ 0.21
RAB43Q86YS6 AC004706.3-202ENST00000621574 984 ntBASIC16.38■□□□□ 0.21
RAB43Q86YS6 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB43Q86YS6 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB43Q86YS6 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB43Q86YS6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB43Q86YS6 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB43Q86YS6 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB43Q86YS6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB43Q86YS6 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB43Q86YS6 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
RAB43Q86YS6 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB43Q86YS6 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.38■□□□□ 0.21
RAB43Q86YS6 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.38■□□□□ 0.21
RAB43Q86YS6 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.38■□□□□ 0.21
RAB43Q86YS6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
RAB43Q86YS6 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.38■□□□□ 0.21
RAB43Q86YS6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms