Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHD1LQ86WJ1 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHD1LQ86WJ1 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CHD1LQ86WJ1 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHD1LQ86WJ1 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC21.11■□□□□ 0.97
CHD1LQ86WJ1 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHD1LQ86WJ1 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC21.11■□□□□ 0.97
CHD1LQ86WJ1 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC21.11■□□□□ 0.97
CHD1LQ86WJ1 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.11■□□□□ 0.97
CHD1LQ86WJ1 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC21.11■□□□□ 0.97
CHD1LQ86WJ1 AL355877.3-201ENST00000622820 899 ntBASIC21.11■□□□□ 0.97
CHD1LQ86WJ1 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CHD1LQ86WJ1 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHD1LQ86WJ1 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHD1LQ86WJ1 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC21.11■□□□□ 0.97
CHD1LQ86WJ1 NCF1C-201ENST00000438382 1427 ntBASIC21.11■□□□□ 0.97
CHD1LQ86WJ1 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC21.11■□□□□ 0.97
CHD1LQ86WJ1 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHD1LQ86WJ1 AC243591.1-201ENST00000452967 1364 ntBASIC21.1■□□□□ 0.97
CHD1LQ86WJ1 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC21.1■□□□□ 0.97
CHD1LQ86WJ1 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHD1LQ86WJ1 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHD1LQ86WJ1 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHD1LQ86WJ1 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CHD1LQ86WJ1 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHD1LQ86WJ1 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CHD1LQ86WJ1 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHD1LQ86WJ1 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHD1LQ86WJ1 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHD1LQ86WJ1 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC21.1■□□□□ 0.97
CHD1LQ86WJ1 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC21.1■□□□□ 0.97
CHD1LQ86WJ1 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC21.1■□□□□ 0.97
CHD1LQ86WJ1 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CHD1LQ86WJ1 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHD1LQ86WJ1 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHD1LQ86WJ1 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHD1LQ86WJ1 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CHD1LQ86WJ1 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.1■□□□□ 0.97
CHD1LQ86WJ1 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHD1LQ86WJ1 TERC-201ENST00000602385 541 ntBASIC21.1■□□□□ 0.97
CHD1LQ86WJ1 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC21.1■□□□□ 0.97
CHD1LQ86WJ1 AL121772.3-201ENST00000610840 674 ntBASIC21.1■□□□□ 0.97
CHD1LQ86WJ1 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CHD1LQ86WJ1 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.1■□□□□ 0.97
CHD1LQ86WJ1 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHD1LQ86WJ1 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHD1LQ86WJ1 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHD1LQ86WJ1 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHD1LQ86WJ1 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHD1LQ86WJ1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CHD1LQ86WJ1 HLA-A-202ENST00000376806 1854 ntBASIC21.09■□□□□ 0.97
CHD1LQ86WJ1 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CHD1LQ86WJ1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHD1LQ86WJ1 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC21.09■□□□□ 0.97
CHD1LQ86WJ1 FOS-208ENST00000555686 1496 ntTSL 2 BASIC21.09■□□□□ 0.97
CHD1LQ86WJ1 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CHD1LQ86WJ1 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHD1LQ86WJ1 NABP1-203ENST00000409510 843 ntTSL 5 BASIC21.09■□□□□ 0.97
CHD1LQ86WJ1 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC21.09■□□□□ 0.97
CHD1LQ86WJ1 FGFR3P6-201ENST00000457012 610 ntBASIC21.09■□□□□ 0.97
CHD1LQ86WJ1 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.09■□□□□ 0.97
CHD1LQ86WJ1 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.09■□□□□ 0.97
CHD1LQ86WJ1 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC21.09■□□□□ 0.97
CHD1LQ86WJ1 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CHD1LQ86WJ1 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHD1LQ86WJ1 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CHD1LQ86WJ1 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHD1LQ86WJ1 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC21.09■□□□□ 0.97
CHD1LQ86WJ1 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CHD1LQ86WJ1 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC21.09■□□□□ 0.97
CHD1LQ86WJ1 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CHD1LQ86WJ1 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHD1LQ86WJ1 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC21.08■□□□□ 0.97
CHD1LQ86WJ1 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHD1LQ86WJ1 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHD1LQ86WJ1 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHD1LQ86WJ1 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHD1LQ86WJ1 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CHD1LQ86WJ1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CHD1LQ86WJ1 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHD1LQ86WJ1 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHD1LQ86WJ1 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHD1LQ86WJ1 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHD1LQ86WJ1 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CHD1LQ86WJ1 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC21.08■□□□□ 0.97
CHD1LQ86WJ1 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC21.08■□□□□ 0.97
CHD1LQ86WJ1 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC21.08■□□□□ 0.97
CHD1LQ86WJ1 AL391256.1-201ENST00000443260 1855 ntBASIC21.08■□□□□ 0.97
CHD1LQ86WJ1 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
CHD1LQ86WJ1 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC21.08■□□□□ 0.97
CHD1LQ86WJ1 AP002490.2-201ENST00000524791 560 ntBASIC21.08■□□□□ 0.97
CHD1LQ86WJ1 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CHD1LQ86WJ1 SART3-203ENST00000546611 1184 ntBASIC21.08■□□□□ 0.97
CHD1LQ86WJ1 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC21.08■□□□□ 0.97
CHD1LQ86WJ1 TPM1-218ENST00000559281 851 ntTSL 5 BASIC21.08■□□□□ 0.97
CHD1LQ86WJ1 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC21.08■□□□□ 0.97
CHD1LQ86WJ1 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CHD1LQ86WJ1 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHD1LQ86WJ1 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC21.08■□□□□ 0.96
CHD1LQ86WJ1 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms