Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RTTNQ86VV8 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
RTTNQ86VV8 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RTTNQ86VV8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
RTTNQ86VV8 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RTTNQ86VV8 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RTTNQ86VV8 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RTTNQ86VV8 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RTTNQ86VV8 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RTTNQ86VV8 AC092171.3-201ENST00000610122 2651 ntBASIC15.15■□□□□ 0.02
RTTNQ86VV8 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RTTNQ86VV8 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RTTNQ86VV8 AL353593.2-201ENST00000602529 1483 ntBASIC15.15■□□□□ 0.02
RTTNQ86VV8 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RTTNQ86VV8 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RTTNQ86VV8 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RTTNQ86VV8 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RTTNQ86VV8 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.15■□□□□ 0.02
RTTNQ86VV8 ACTG1P4-201ENST00000425123 1122 ntBASIC15.15■□□□□ 0.02
RTTNQ86VV8 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.15■□□□□ 0.02
RTTNQ86VV8 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.15■□□□□ 0.02
RTTNQ86VV8 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RTTNQ86VV8 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.15■□□□□ 0.02
RTTNQ86VV8 NKAPP1-205ENST00000585790 367 ntBASIC15.15■□□□□ 0.02
RTTNQ86VV8 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.15■□□□□ 0.02
RTTNQ86VV8 AP001269.4-201ENST00000609611 512 ntBASIC15.15■□□□□ 0.02
RTTNQ86VV8 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.15■□□□□ 0.02
RTTNQ86VV8 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.15■□□□□ 0.02
RTTNQ86VV8 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.14■□□□□ 0.01
RTTNQ86VV8 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RTTNQ86VV8 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTTNQ86VV8 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTTNQ86VV8 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTTNQ86VV8 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTTNQ86VV8 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTTNQ86VV8 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RTTNQ86VV8 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RTTNQ86VV8 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RTTNQ86VV8 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTTNQ86VV8 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTTNQ86VV8 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTTNQ86VV8 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTTNQ86VV8 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.14■□□□□ 0.01
RTTNQ86VV8 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.14■□□□□ 0.01
RTTNQ86VV8 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
RTTNQ86VV8 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RTTNQ86VV8 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTTNQ86VV8 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RTTNQ86VV8 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTTNQ86VV8 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTTNQ86VV8 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RTTNQ86VV8 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.14■□□□□ 0.01
RTTNQ86VV8 MIR3197-201ENST00000582241 73 ntBASIC15.14■□□□□ 0.01
RTTNQ86VV8 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RTTNQ86VV8 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RTTNQ86VV8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTTNQ86VV8 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
RTTNQ86VV8 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.14■□□□□ 0.01
RTTNQ86VV8 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.14■□□□□ 0.01
RTTNQ86VV8 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.14■□□□□ 0.01
RTTNQ86VV8 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTTNQ86VV8 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTTNQ86VV8 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTTNQ86VV8 AC008741.2-201ENST00000612792 3115 ntBASIC15.14■□□□□ 0.01
RTTNQ86VV8 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RTTNQ86VV8 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.14■□□□□ 0.01
RTTNQ86VV8 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RTTNQ86VV8 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
RTTNQ86VV8 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RTTNQ86VV8 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTTNQ86VV8 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTTNQ86VV8 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RTTNQ86VV8 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.13■□□□□ 0.01
RTTNQ86VV8 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.13■□□□□ 0.01
RTTNQ86VV8 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RTTNQ86VV8 AC008608.2-201ENST00000606089 416 ntBASIC15.13■□□□□ 0.01
RTTNQ86VV8 AC148477.8-201ENST00000624298 468 ntBASIC15.13■□□□□ 0.01
RTTNQ86VV8 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.13■□□□□ 0.01
RTTNQ86VV8 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTTNQ86VV8 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.13■□□□□ 0.01
RTTNQ86VV8 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RTTNQ86VV8 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.13■□□□□ 0.01
RTTNQ86VV8 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
RTTNQ86VV8 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.13■□□□□ 0.01
RTTNQ86VV8 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RTTNQ86VV8 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTTNQ86VV8 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTTNQ86VV8 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
RTTNQ86VV8 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RTTNQ86VV8 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.13■□□□□ 0.01
RTTNQ86VV8 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.13■□□□□ 0.01
RTTNQ86VV8 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.13■□□□□ 0.01
RTTNQ86VV8 MTDHP3-201ENST00000594186 672 ntBASIC15.13■□□□□ 0.01
RTTNQ86VV8 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RTTNQ86VV8 HCG11-201ENST00000411553 5696 ntBASIC15.13■□□□□ 0.01
RTTNQ86VV8 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTTNQ86VV8 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTTNQ86VV8 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.13■□□□□ 0.01
RTTNQ86VV8 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RTTNQ86VV8 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms