Protein–RNA interactions for Protein: Q86UP3

ZFHX4, Zinc finger homeobox protein 4, humanhuman

Predictions only

Length 3,567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4Q86UP3 AL391825.1-201ENST00000457671 1364 ntBASIC15.83■□□□□ 0.13
ZFHX4Q86UP3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
ZFHX4Q86UP3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
ZFHX4Q86UP3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ZFHX4Q86UP3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ZFHX4Q86UP3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ZFHX4Q86UP3 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 IGF1-203ENST00000392904 761 ntTSL 5 BASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 SERF2-206ENST00000409291 807 ntTSL 3 BASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 AC012317.2-201ENST00000623305 2251 ntBASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 FOXO1B-201ENST00000504678 1527 ntBASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ZFHX4Q86UP3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.82■□□□□ 0.12
ZFHX4Q86UP3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZFHX4Q86UP3 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.82■□□□□ 0.12
ZFHX4Q86UP3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
ZFHX4Q86UP3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
ZFHX4Q86UP3 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC15.82■□□□□ 0.12
ZFHX4Q86UP3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.82■□□□□ 0.12
ZFHX4Q86UP3 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZFHX4Q86UP3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZFHX4Q86UP3 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
ZFHX4Q86UP3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZFHX4Q86UP3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZFHX4Q86UP3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZFHX4Q86UP3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
ZFHX4Q86UP3 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZFHX4Q86UP3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZFHX4Q86UP3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZFHX4Q86UP3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.82■□□□□ 0.12
ZFHX4Q86UP3 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ZFHX4Q86UP3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
ZFHX4Q86UP3 WIZP1-201ENST00000531444 2299 ntBASIC15.82■□□□□ 0.12
ZFHX4Q86UP3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.82■□□□□ 0.12
ZFHX4Q86UP3 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZFHX4Q86UP3 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZFHX4Q86UP3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
ZFHX4Q86UP3 RNA5SP412-201ENST00000516234 123 ntBASIC15.82■□□□□ 0.12
ZFHX4Q86UP3 AL590560.3-201ENST00000623350 461 ntBASIC15.82■□□□□ 0.12
ZFHX4Q86UP3 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZFHX4Q86UP3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
ZFHX4Q86UP3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.82■□□□□ 0.12
ZFHX4Q86UP3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
ZFHX4Q86UP3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ZFHX4Q86UP3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.81■□□□□ 0.12
ZFHX4Q86UP3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.81■□□□□ 0.12
ZFHX4Q86UP3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.81■□□□□ 0.12
ZFHX4Q86UP3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ZFHX4Q86UP3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
ZFHX4Q86UP3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.81■□□□□ 0.12
ZFHX4Q86UP3 AP001889.1-201ENST00000525414 633 ntBASIC15.81■□□□□ 0.12
ZFHX4Q86UP3 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.81■□□□□ 0.12
ZFHX4Q86UP3 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC15.81■□□□□ 0.12
ZFHX4Q86UP3 AL118558.3-201ENST00000607414 1079 ntBASIC15.81■□□□□ 0.12
ZFHX4Q86UP3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ZFHX4Q86UP3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
ZFHX4Q86UP3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZFHX4Q86UP3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.81■□□□□ 0.12
ZFHX4Q86UP3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZFHX4Q86UP3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ZFHX4Q86UP3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZFHX4Q86UP3 MIR1247-201ENST00000408206 136 ntBASIC15.81■□□□□ 0.12
ZFHX4Q86UP3 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ZFHX4Q86UP3 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.81■□□□□ 0.12
ZFHX4Q86UP3 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.81■□□□□ 0.12
ZFHX4Q86UP3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.81■□□□□ 0.12
ZFHX4Q86UP3 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.81■□□□□ 0.12
ZFHX4Q86UP3 AL161645.1-201ENST00000622716 1255 ntBASIC15.81■□□□□ 0.12
ZFHX4Q86UP3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.81■□□□□ 0.12
ZFHX4Q86UP3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms