Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 AL391256.1-201ENST00000443260 1855 ntBASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.9□□□□□ -0.02
LRRTM1Q86UE6 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 AC010203.1-204ENST00000548782 407 ntBASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 RNF126P1-202ENST00000569893 925 ntBASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 AC125634.1-201ENST00000438758 1403 ntBASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.89□□□□□ -0.03
LRRTM1Q86UE6 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRTM1Q86UE6 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRTM1Q86UE6 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
LRRTM1Q86UE6 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRRTM1Q86UE6 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRTM1Q86UE6 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRTM1Q86UE6 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRTM1Q86UE6 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRTM1Q86UE6 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRRTM1Q86UE6 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRRTM1Q86UE6 HBZP1-201ENST00000354915 429 ntBASIC14.88□□□□□ -0.03
LRRTM1Q86UE6 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.88□□□□□ -0.03
LRRTM1Q86UE6 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRTM1Q86UE6 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRRTM1Q86UE6 AC103564.2-201ENST00000432853 1299 ntBASIC14.88□□□□□ -0.03
LRRTM1Q86UE6 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRTM1Q86UE6 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LRRTM1Q86UE6 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRTM1Q86UE6 AC145285.6-201ENST00000604632 637 ntBASIC14.88□□□□□ -0.03
LRRTM1Q86UE6 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LRRTM1Q86UE6 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRRTM1Q86UE6 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRTM1Q86UE6 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRRTM1Q86UE6 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.88□□□□□ -0.03
LRRTM1Q86UE6 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.88□□□□□ -0.03
LRRTM1Q86UE6 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRTM1Q86UE6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRTM1Q86UE6 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRTM1Q86UE6 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
LRRTM1Q86UE6 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.88□□□□□ -0.03
LRRTM1Q86UE6 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRTM1Q86UE6 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRRTM1Q86UE6 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LRRTM1Q86UE6 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.88□□□□□ -0.03
LRRTM1Q86UE6 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LRRTM1Q86UE6 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms