Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 ANKRD26P3-201ENST00000454044 2748 ntBASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 FAM220CP-201ENST00000395253 831 ntBASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 AC122714.2-201ENST00000502787 707 ntBASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 KRT8P26-201ENST00000534154 1276 ntBASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 AC046185.3-201ENST00000623228 1824 ntBASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
MRPL55Q7Z7F7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 AC125634.1-201ENST00000438758 1403 ntBASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 RN7SL606P-201ENST00000472779 293 ntBASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 AL136038.3-201ENST00000561909 1096 ntBASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 AC093525.9-201ENST00000624961 1746 ntBASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 NKILA-202ENST00000614771 2598 ntBASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
MRPL55Q7Z7F7 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms