Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 TSPY19P-201ENST00000418461 509 ntBASIC15.06■□□□□ 0
HIST2H3AQ71DI3 TSPY18P-201ENST00000441642 509 ntBASIC15.06■□□□□ 0
HIST2H3AQ71DI3 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 KRT18P31-201ENST00000506277 1292 ntBASIC15.06■□□□□ 0
HIST2H3AQ71DI3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 AL121772.3-201ENST00000610840 674 ntBASIC15.06■□□□□ 0
HIST2H3AQ71DI3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
HIST2H3AQ71DI3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.05■□□□□ 0
HIST2H3AQ71DI3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC15.05■□□□□ 0
HIST2H3AQ71DI3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HIST2H3AQ71DI3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
HIST2H3AQ71DI3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.05■□□□□ 0
HIST2H3AQ71DI3 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HIST2H3AQ71DI3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HIST2H3AQ71DI3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
HIST2H3AQ71DI3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HIST2H3AQ71DI3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HIST2H3AQ71DI3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.05■□□□□ -0
HIST2H3AQ71DI3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.05■□□□□ -0
HIST2H3AQ71DI3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.05■□□□□ -0
HIST2H3AQ71DI3 LINC00982-205ENST00000420957 435 ntBASIC15.05■□□□□ -0
HIST2H3AQ71DI3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
HIST2H3AQ71DI3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.05■□□□□ -0
HIST2H3AQ71DI3 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.05■□□□□ -0
HIST2H3AQ71DI3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC15.05■□□□□ -0
HIST2H3AQ71DI3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.05■□□□□ -0
HIST2H3AQ71DI3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
HIST2H3AQ71DI3 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
HIST2H3AQ71DI3 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
HIST2H3AQ71DI3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.05■□□□□ -0
HIST2H3AQ71DI3 OR6D1P-203ENST00000641209 4860 ntBASIC15.05■□□□□ -0
HIST2H3AQ71DI3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.05■□□□□ -0
HIST2H3AQ71DI3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.05■□□□□ -0
HIST2H3AQ71DI3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.05■□□□□ -0
HIST2H3AQ71DI3 AC097637.2-201ENST00000624096 1997 ntBASIC15.05■□□□□ -0
HIST2H3AQ71DI3 AC105020.1-201ENST00000435356 2205 ntBASIC15.05■□□□□ -0
HIST2H3AQ71DI3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
HIST2H3AQ71DI3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.05■□□□□ -0
HIST2H3AQ71DI3 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.05■□□□□ -0
HIST2H3AQ71DI3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HIST2H3AQ71DI3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HIST2H3AQ71DI3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HIST2H3AQ71DI3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
HIST2H3AQ71DI3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HIST2H3AQ71DI3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HIST2H3AQ71DI3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HIST2H3AQ71DI3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.04■□□□□ -0
HIST2H3AQ71DI3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HIST2H3AQ71DI3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.04■□□□□ -0
HIST2H3AQ71DI3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HIST2H3AQ71DI3 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HIST2H3AQ71DI3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.04■□□□□ -0
HIST2H3AQ71DI3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HIST2H3AQ71DI3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.04■□□□□ -0
HIST2H3AQ71DI3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.04■□□□□ -0
HIST2H3AQ71DI3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
HIST2H3AQ71DI3 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HIST2H3AQ71DI3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.04■□□□□ -0
HIST2H3AQ71DI3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC15.04■□□□□ -0
HIST2H3AQ71DI3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HIST2H3AQ71DI3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HIST2H3AQ71DI3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms