Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF220Q5VTB9 AC073508.3-201ENST00000619697 1419 ntBASIC16.54■□□□□ 0.24
RNF220Q5VTB9 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF220Q5VTB9 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
RNF220Q5VTB9 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF220Q5VTB9 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF220Q5VTB9 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF220Q5VTB9 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
RNF220Q5VTB9 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF220Q5VTB9 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.54■□□□□ 0.24
RNF220Q5VTB9 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RNF220Q5VTB9 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.54■□□□□ 0.24
RNF220Q5VTB9 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
RNF220Q5VTB9 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF220Q5VTB9 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF220Q5VTB9 SPDYE15P-201ENST00000424157 909 ntBASIC16.54■□□□□ 0.24
RNF220Q5VTB9 HLA-F-220ENST00000434407 884 ntBASIC16.54■□□□□ 0.24
RNF220Q5VTB9 KRT18P65-201ENST00000439811 1286 ntBASIC16.54■□□□□ 0.24
RNF220Q5VTB9 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF220Q5VTB9 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
RNF220Q5VTB9 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.54■□□□□ 0.24
RNF220Q5VTB9 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.54■□□□□ 0.24
RNF220Q5VTB9 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF220Q5VTB9 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
RNF220Q5VTB9 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RNF220Q5VTB9 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF220Q5VTB9 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF220Q5VTB9 AP002414.2-201ENST00000591780 3365 ntBASIC16.54■□□□□ 0.24
RNF220Q5VTB9 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF220Q5VTB9 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RNF220Q5VTB9 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RNF220Q5VTB9 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF220Q5VTB9 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RNF220Q5VTB9 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.54■□□□□ 0.24
RNF220Q5VTB9 AL365203.3-201ENST00000609742 2057 ntBASIC16.54■□□□□ 0.24
RNF220Q5VTB9 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF220Q5VTB9 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF220Q5VTB9 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
RNF220Q5VTB9 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF220Q5VTB9 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
RNF220Q5VTB9 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
RNF220Q5VTB9 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
RNF220Q5VTB9 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF220Q5VTB9 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.53■□□□□ 0.24
RNF220Q5VTB9 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RNF220Q5VTB9 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF220Q5VTB9 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF220Q5VTB9 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF220Q5VTB9 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF220Q5VTB9 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF220Q5VTB9 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF220Q5VTB9 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF220Q5VTB9 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF220Q5VTB9 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF220Q5VTB9 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RNF220Q5VTB9 YBX1P2-201ENST00000489612 999 ntBASIC16.53■□□□□ 0.24
RNF220Q5VTB9 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.53■□□□□ 0.24
RNF220Q5VTB9 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF220Q5VTB9 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
RNF220Q5VTB9 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.53■□□□□ 0.24
RNF220Q5VTB9 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.53■□□□□ 0.24
RNF220Q5VTB9 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF220Q5VTB9 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RNF220Q5VTB9 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF220Q5VTB9 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF220Q5VTB9 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RNF220Q5VTB9 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RNF220Q5VTB9 RNF216P1-203ENST00000404404 2427 ntBASIC16.53■□□□□ 0.24
RNF220Q5VTB9 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF220Q5VTB9 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.52■□□□□ 0.24
RNF220Q5VTB9 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.52■□□□□ 0.24
RNF220Q5VTB9 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
RNF220Q5VTB9 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF220Q5VTB9 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF220Q5VTB9 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF220Q5VTB9 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF220Q5VTB9 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF220Q5VTB9 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF220Q5VTB9 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RNF220Q5VTB9 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.52■□□□□ 0.24
RNF220Q5VTB9 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.52■□□□□ 0.24
RNF220Q5VTB9 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.52■□□□□ 0.24
RNF220Q5VTB9 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF220Q5VTB9 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RNF220Q5VTB9 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.52■□□□□ 0.24
RNF220Q5VTB9 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.52■□□□□ 0.24
RNF220Q5VTB9 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.52■□□□□ 0.24
RNF220Q5VTB9 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.52■□□□□ 0.24
RNF220Q5VTB9 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF220Q5VTB9 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.52■□□□□ 0.24
RNF220Q5VTB9 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.52■□□□□ 0.24
RNF220Q5VTB9 AC116407.2-201ENST00000613639 860 ntBASIC16.52■□□□□ 0.24
RNF220Q5VTB9 AC011558.1-201ENST00000623459 338 ntBASIC16.52■□□□□ 0.24
RNF220Q5VTB9 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RNF220Q5VTB9 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
RNF220Q5VTB9 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.52■□□□□ 0.23
RNF220Q5VTB9 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.52■□□□□ 0.23
RNF220Q5VTB9 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF220Q5VTB9 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RNF220Q5VTB9 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms