Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC21.29■■□□□ 1
RC3H1Q5TC82 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC21.29■■□□□ 1
RC3H1Q5TC82 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RC3H1Q5TC82 AL353779.1-201ENST00000434793 351 ntBASIC21.29■■□□□ 1
RC3H1Q5TC82 KRT17P7-201ENST00000451704 1104 ntBASIC21.29■■□□□ 1
RC3H1Q5TC82 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC21.29■■□□□ 1
RC3H1Q5TC82 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC21.29■■□□□ 1
RC3H1Q5TC82 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RC3H1Q5TC82 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC21.29■■□□□ 1
RC3H1Q5TC82 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
RC3H1Q5TC82 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RC3H1Q5TC82 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC21.29■■□□□ 1
RC3H1Q5TC82 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC21.29■■□□□ 1
RC3H1Q5TC82 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
RC3H1Q5TC82 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RC3H1Q5TC82 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC21.29■■□□□ 1
RC3H1Q5TC82 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RC3H1Q5TC82 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RC3H1Q5TC82 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
RC3H1Q5TC82 AC009113.1-201ENST00000570267 2443 ntBASIC21.28■■□□□ 1
RC3H1Q5TC82 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC21.28■■□□□ 1
RC3H1Q5TC82 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
RC3H1Q5TC82 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RC3H1Q5TC82 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
RC3H1Q5TC82 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RC3H1Q5TC82 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC21.28■■□□□ 1
RC3H1Q5TC82 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
RC3H1Q5TC82 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC21.28■■□□□ 1
RC3H1Q5TC82 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC21.28■■□□□ 1
RC3H1Q5TC82 ATP5G2P4-201ENST00000442175 420 ntBASIC21.28■■□□□ 1
RC3H1Q5TC82 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC21.28■■□□□ 1
RC3H1Q5TC82 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC21.28■■□□□ 1
RC3H1Q5TC82 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC21.28■■□□□ 1
RC3H1Q5TC82 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC21.28■■□□□ 1
RC3H1Q5TC82 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
RC3H1Q5TC82 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
RC3H1Q5TC82 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RC3H1Q5TC82 BICD1-207ENST00000551848 1962 ntBASIC21.28■■□□□ 1
RC3H1Q5TC82 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RC3H1Q5TC82 AC016396.2-201ENST00000562575 1417 ntBASIC21.28■■□□□ 1
RC3H1Q5TC82 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC21.28■■□□□ 1
RC3H1Q5TC82 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
RC3H1Q5TC82 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.27■■□□□ 1
RC3H1Q5TC82 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
RC3H1Q5TC82 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC21.27■■□□□ 1
RC3H1Q5TC82 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RC3H1Q5TC82 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
RC3H1Q5TC82 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RC3H1Q5TC82 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC21.27■■□□□ 1
RC3H1Q5TC82 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC21.27■■□□□ 1
RC3H1Q5TC82 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC21.27■■□□□ 1
RC3H1Q5TC82 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC21.27■■□□□ 1
RC3H1Q5TC82 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC21.27■■□□□ 1
RC3H1Q5TC82 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC21.27■■□□□ 1
RC3H1Q5TC82 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC21.27■■□□□ 1
RC3H1Q5TC82 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC21.27■■□□□ 1
RC3H1Q5TC82 LITAF-210ENST00000571976 548 ntTSL 2 BASIC21.27■■□□□ 1
RC3H1Q5TC82 LITAF-214ENST00000574703 486 ntTSL 2 BASIC21.27■■□□□ 1
RC3H1Q5TC82 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC21.27■■□□□ 1
RC3H1Q5TC82 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC21.27■■□□□ 1
RC3H1Q5TC82 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC21.27■■□□□ 1
RC3H1Q5TC82 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RC3H1Q5TC82 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RC3H1Q5TC82 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC21.27■■□□□ 1
RC3H1Q5TC82 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
RC3H1Q5TC82 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC21.27■□□□□ 0.99
RC3H1Q5TC82 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
RC3H1Q5TC82 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RC3H1Q5TC82 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
RC3H1Q5TC82 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RC3H1Q5TC82 AL021920.2-201ENST00000624828 1351 ntBASIC21.26■□□□□ 0.99
RC3H1Q5TC82 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC21.26■□□□□ 0.99
RC3H1Q5TC82 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RC3H1Q5TC82 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RC3H1Q5TC82 RPL37AP1-201ENST00000412502 279 ntBASIC21.26■□□□□ 0.99
RC3H1Q5TC82 AL353705.2-201ENST00000428243 662 ntBASIC21.26■□□□□ 0.99
RC3H1Q5TC82 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RC3H1Q5TC82 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
RC3H1Q5TC82 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
RC3H1Q5TC82 PRYP6-201ENST00000514804 343 ntBASIC21.26■□□□□ 0.99
RC3H1Q5TC82 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC21.26■□□□□ 0.99
RC3H1Q5TC82 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC21.26■□□□□ 0.99
RC3H1Q5TC82 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC21.26■□□□□ 0.99
RC3H1Q5TC82 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC21.26■□□□□ 0.99
RC3H1Q5TC82 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC21.26■□□□□ 0.99
RC3H1Q5TC82 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RC3H1Q5TC82 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RC3H1Q5TC82 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC21.26■□□□□ 0.99
RC3H1Q5TC82 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
RC3H1Q5TC82 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.26■□□□□ 0.99
RC3H1Q5TC82 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RC3H1Q5TC82 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.26■□□□□ 0.99
RC3H1Q5TC82 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
RC3H1Q5TC82 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RC3H1Q5TC82 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC21.25■□□□□ 0.99
RC3H1Q5TC82 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC21.25■□□□□ 0.99
RC3H1Q5TC82 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RC3H1Q5TC82 FRMD8P1-201ENST00000440433 1524 ntBASIC21.25■□□□□ 0.99
RC3H1Q5TC82 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RC3H1Q5TC82 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms