Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 TUBB8P12-201ENST00000308911 1335 ntBASIC16.84■□□□□ 0.29
CTSL3PQ5NE16 TUBB7P-202ENST00000428444 1305 ntBASIC16.84■□□□□ 0.29
CTSL3PQ5NE16 TUBB8P7-204ENST00000567960 1332 ntBASIC16.84■□□□□ 0.29
CTSL3PQ5NE16 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.84■□□□□ 0.29
CTSL3PQ5NE16 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.84■□□□□ 0.29
CTSL3PQ5NE16 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTSL3PQ5NE16 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.84■□□□□ 0.29
CTSL3PQ5NE16 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.84■□□□□ 0.29
CTSL3PQ5NE16 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTSL3PQ5NE16 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTSL3PQ5NE16 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTSL3PQ5NE16 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CTSL3PQ5NE16 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.84■□□□□ 0.29
CTSL3PQ5NE16 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.84■□□□□ 0.29
CTSL3PQ5NE16 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CTSL3PQ5NE16 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CTSL3PQ5NE16 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CTSL3PQ5NE16 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.84■□□□□ 0.29
CTSL3PQ5NE16 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CTSL3PQ5NE16 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CTSL3PQ5NE16 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CTSL3PQ5NE16 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CTSL3PQ5NE16 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
CTSL3PQ5NE16 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CTSL3PQ5NE16 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.29
CTSL3PQ5NE16 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTSL3PQ5NE16 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CTSL3PQ5NE16 AL645728.1-201ENST00000366221 2101 ntBASIC16.83■□□□□ 0.28
CTSL3PQ5NE16 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.83■□□□□ 0.28
CTSL3PQ5NE16 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CTSL3PQ5NE16 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTSL3PQ5NE16 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CTSL3PQ5NE16 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTSL3PQ5NE16 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CTSL3PQ5NE16 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.83■□□□□ 0.28
CTSL3PQ5NE16 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CTSL3PQ5NE16 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CTSL3PQ5NE16 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CTSL3PQ5NE16 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CTSL3PQ5NE16 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.83■□□□□ 0.28
CTSL3PQ5NE16 AC006557.2-201ENST00000592985 1240 ntBASIC16.83■□□□□ 0.28
CTSL3PQ5NE16 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CTSL3PQ5NE16 AC104692.2-201ENST00000603054 253 ntBASIC16.83■□□□□ 0.28
CTSL3PQ5NE16 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.83■□□□□ 0.28
CTSL3PQ5NE16 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.83■□□□□ 0.28
CTSL3PQ5NE16 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.83■□□□□ 0.28
CTSL3PQ5NE16 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CTSL3PQ5NE16 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CTSL3PQ5NE16 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.83■□□□□ 0.28
CTSL3PQ5NE16 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.83■□□□□ 0.28
CTSL3PQ5NE16 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTSL3PQ5NE16 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CTSL3PQ5NE16 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.83■□□□□ 0.28
CTSL3PQ5NE16 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CTSL3PQ5NE16 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CTSL3PQ5NE16 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 AC004870.1-201ENST00000315132 882 ntBASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 KRT18P67-201ENST00000432816 1264 ntBASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 AL805961.1-202ENST00000641562 540 ntBASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTSL3PQ5NE16 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms