Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
HMGCS1Q01581 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGCS1Q01581 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGCS1Q01581 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.51■□□□□ 0.23
HMGCS1Q01581 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
HMGCS1Q01581 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
HMGCS1Q01581 NUS1P2-201ENST00000417358 873 ntBASIC16.51■□□□□ 0.23
HMGCS1Q01581 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGCS1Q01581 POM121L3P-201ENST00000419331 1163 ntBASIC16.51■□□□□ 0.23
HMGCS1Q01581 ATP5G2P1-201ENST00000433580 426 ntBASIC16.51■□□□□ 0.23
HMGCS1Q01581 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
HMGCS1Q01581 NUS1P1-201ENST00000446295 882 ntBASIC16.51■□□□□ 0.23
HMGCS1Q01581 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGCS1Q01581 AC012615.1-201ENST00000565797 1299 ntBASIC16.51■□□□□ 0.23
HMGCS1Q01581 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.51■□□□□ 0.23
HMGCS1Q01581 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.51■□□□□ 0.23
HMGCS1Q01581 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.51■□□□□ 0.23
HMGCS1Q01581 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGCS1Q01581 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGCS1Q01581 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGCS1Q01581 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.51■□□□□ 0.23
HMGCS1Q01581 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGCS1Q01581 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
HMGCS1Q01581 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HMGCS1Q01581 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HMGCS1Q01581 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCS1Q01581 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCS1Q01581 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.5■□□□□ 0.23
HMGCS1Q01581 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
HMGCS1Q01581 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.5■□□□□ 0.23
HMGCS1Q01581 PCDHB17P-201ENST00000539533 2393 ntBASIC16.5■□□□□ 0.23
HMGCS1Q01581 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCS1Q01581 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCS1Q01581 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCS1Q01581 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCS1Q01581 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HMGCS1Q01581 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
HMGCS1Q01581 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.5■□□□□ 0.23
HMGCS1Q01581 SPDYE21P-201ENST00000413323 827 ntBASIC16.5■□□□□ 0.23
HMGCS1Q01581 AL020989.1-201ENST00000422979 469 ntBASIC16.5■□□□□ 0.23
HMGCS1Q01581 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.5■□□□□ 0.23
HMGCS1Q01581 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
HMGCS1Q01581 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.5■□□□□ 0.23
HMGCS1Q01581 SIGLEC30P-201ENST00000455569 941 ntBASIC16.5■□□□□ 0.23
HMGCS1Q01581 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.5■□□□□ 0.23
HMGCS1Q01581 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
HMGCS1Q01581 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.5■□□□□ 0.23
HMGCS1Q01581 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCS1Q01581 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.5■□□□□ 0.23
HMGCS1Q01581 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.5■□□□□ 0.23
HMGCS1Q01581 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
HMGCS1Q01581 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
HMGCS1Q01581 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
HMGCS1Q01581 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCS1Q01581 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCS1Q01581 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCS1Q01581 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.5■□□□□ 0.23
HMGCS1Q01581 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
HMGCS1Q01581 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
HMGCS1Q01581 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCS1Q01581 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCS1Q01581 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCS1Q01581 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCS1Q01581 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCS1Q01581 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HMGCS1Q01581 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.49■□□□□ 0.23
HMGCS1Q01581 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCS1Q01581 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCS1Q01581 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.49■□□□□ 0.23
HMGCS1Q01581 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCS1Q01581 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCS1Q01581 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.49■□□□□ 0.23
HMGCS1Q01581 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCS1Q01581 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCS1Q01581 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCS1Q01581 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCS1Q01581 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HMGCS1Q01581 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCS1Q01581 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCS1Q01581 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.49■□□□□ 0.23
HMGCS1Q01581 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCS1Q01581 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCS1Q01581 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.49■□□□□ 0.23
HMGCS1Q01581 MIR5100-201ENST00000579544 119 ntBASIC16.49■□□□□ 0.23
HMGCS1Q01581 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCS1Q01581 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCS1Q01581 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.49■□□□□ 0.23
HMGCS1Q01581 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
HMGCS1Q01581 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCS1Q01581 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
HMGCS1Q01581 AC004817.3-201ENST00000602957 2129 ntBASIC16.49■□□□□ 0.23
HMGCS1Q01581 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCS1Q01581 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCS1Q01581 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
HMGCS1Q01581 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCS1Q01581 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCS1Q01581 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCS1Q01581 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
HMGCS1Q01581 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HMGCS1Q01581 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms