Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 STOM-203ENST00000538954 1257 ntTSL 5 BASIC21.02■□□□□ 0.95
SCN7AQ01118 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC21.02■□□□□ 0.95
SCN7AQ01118 AC010336.2-201ENST00000564226 506 ntBASIC21.02■□□□□ 0.95
SCN7AQ01118 AC140912.1-201ENST00000577171 1054 ntBASIC21.02■□□□□ 0.95
SCN7AQ01118 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC21.02■□□□□ 0.95
SCN7AQ01118 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC21.02■□□□□ 0.95
SCN7AQ01118 AL358472.5-202ENST00000641448 1267 ntBASIC21.02■□□□□ 0.95
SCN7AQ01118 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC21.02■□□□□ 0.95
SCN7AQ01118 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC21.01■□□□□ 0.95
SCN7AQ01118 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SCN7AQ01118 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SCN7AQ01118 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SCN7AQ01118 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.01■□□□□ 0.95
SCN7AQ01118 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN7AQ01118 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC21.01■□□□□ 0.95
SCN7AQ01118 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN7AQ01118 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN7AQ01118 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC21.01■□□□□ 0.95
SCN7AQ01118 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC21.01■□□□□ 0.95
SCN7AQ01118 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC21.01■□□□□ 0.95
SCN7AQ01118 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC21.01■□□□□ 0.95
SCN7AQ01118 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SCN7AQ01118 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SCN7AQ01118 AC108860.2-201ENST00000562760 2183 ntBASIC21.01■□□□□ 0.95
SCN7AQ01118 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
SCN7AQ01118 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SCN7AQ01118 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC21.01■□□□□ 0.95
SCN7AQ01118 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SCN7AQ01118 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SCN7AQ01118 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SCN7AQ01118 AC073439.1-201ENST00000624121 1774 ntBASIC21■□□□□ 0.95
SCN7AQ01118 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
SCN7AQ01118 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC21■□□□□ 0.95
SCN7AQ01118 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC21■□□□□ 0.95
SCN7AQ01118 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC21■□□□□ 0.95
SCN7AQ01118 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC21■□□□□ 0.95
SCN7AQ01118 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC21■□□□□ 0.95
SCN7AQ01118 AL512638.1-201ENST00000457493 794 ntBASIC21■□□□□ 0.95
SCN7AQ01118 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC21■□□□□ 0.95
SCN7AQ01118 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC21■□□□□ 0.95
SCN7AQ01118 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
SCN7AQ01118 AC124947.2-201ENST00000547118 1133 ntBASIC21■□□□□ 0.95
SCN7AQ01118 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SCN7AQ01118 MPI-209ENST00000564003 1195 ntTSL 2 BASIC21■□□□□ 0.95
SCN7AQ01118 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC21■□□□□ 0.95
SCN7AQ01118 IGHV3-72-202ENST00000621503 303 ntBASIC21■□□□□ 0.95
SCN7AQ01118 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC21■□□□□ 0.95
SCN7AQ01118 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC21■□□□□ 0.95
SCN7AQ01118 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SCN7AQ01118 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC21■□□□□ 0.95
SCN7AQ01118 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SCN7AQ01118 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN7AQ01118 AL353705.2-201ENST00000428243 662 ntBASIC20.99■□□□□ 0.95
SCN7AQ01118 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SCN7AQ01118 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SCN7AQ01118 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SCN7AQ01118 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC20.99■□□□□ 0.95
SCN7AQ01118 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC20.99■□□□□ 0.95
SCN7AQ01118 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC20.99■□□□□ 0.95
SCN7AQ01118 AC003101.2-201ENST00000612557 442 ntBASIC20.99■□□□□ 0.95
SCN7AQ01118 RAB34-223ENST00000636154 730 ntTSL 2 BASIC20.99■□□□□ 0.95
SCN7AQ01118 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN7AQ01118 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC20.99■□□□□ 0.95
SCN7AQ01118 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN7AQ01118 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN7AQ01118 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN7AQ01118 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN7AQ01118 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN7AQ01118 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
SCN7AQ01118 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SCN7AQ01118 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC20.99■□□□□ 0.95
SCN7AQ01118 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC20.99■□□□□ 0.95
SCN7AQ01118 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN7AQ01118 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN7AQ01118 REEP4-207ENST00000523293 913 ntTSL 3 BASIC20.99■□□□□ 0.95
SCN7AQ01118 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN7AQ01118 ZNF890P-202ENST00000530367 1156 ntBASIC20.99■□□□□ 0.95
SCN7AQ01118 AC104794.3-201ENST00000566840 1248 ntBASIC20.99■□□□□ 0.95
SCN7AQ01118 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC20.99■□□□□ 0.95
SCN7AQ01118 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN7AQ01118 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC20.99■□□□□ 0.95
SCN7AQ01118 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.99■□□□□ 0.95
SCN7AQ01118 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN7AQ01118 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
SCN7AQ01118 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SCN7AQ01118 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.98■□□□□ 0.95
SCN7AQ01118 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCN7AQ01118 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SCN7AQ01118 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SCN7AQ01118 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SCN7AQ01118 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.98■□□□□ 0.95
SCN7AQ01118 CETN4P-206ENST00000642099 2168 ntBASIC20.98■□□□□ 0.95
SCN7AQ01118 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCN7AQ01118 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SCN7AQ01118 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.98■□□□□ 0.95
SCN7AQ01118 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCN7AQ01118 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCN7AQ01118 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCN7AQ01118 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC20.98■□□□□ 0.95
SCN7AQ01118 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms