Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNRPFP62306 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNRPFP62306 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNRPFP62306 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNRPFP62306 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNRPFP62306 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNRPFP62306 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNRPFP62306 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNRPFP62306 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNRPFP62306 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.54■□□□□ 0.56
SNRPFP62306 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.54■□□□□ 0.56
SNRPFP62306 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SNRPFP62306 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SNRPFP62306 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.54■□□□□ 0.56
SNRPFP62306 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.54■□□□□ 0.56
SNRPFP62306 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.54■□□□□ 0.56
SNRPFP62306 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.54■□□□□ 0.56
SNRPFP62306 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SNRPFP62306 AC005915.1-201ENST00000624912 2018 ntBASIC18.54■□□□□ 0.56
SNRPFP62306 PCDHB17P-201ENST00000539533 2393 ntBASIC18.54■□□□□ 0.56
SNRPFP62306 LTB4R2-202ENST00000528054 3092 ntBASIC18.54■□□□□ 0.56
SNRPFP62306 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNRPFP62306 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SNRPFP62306 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
SNRPFP62306 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNRPFP62306 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNRPFP62306 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.54■□□□□ 0.56
SNRPFP62306 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNRPFP62306 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
SNRPFP62306 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.54■□□□□ 0.56
SNRPFP62306 AC108073.2-201ENST00000464002 357 ntBASIC18.54■□□□□ 0.56
SNRPFP62306 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNRPFP62306 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.54■□□□□ 0.56
SNRPFP62306 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.54■□□□□ 0.56
SNRPFP62306 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
SNRPFP62306 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.54■□□□□ 0.56
SNRPFP62306 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SNRPFP62306 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.54■□□□□ 0.56
SNRPFP62306 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.54■□□□□ 0.56
SNRPFP62306 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNRPFP62306 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SNRPFP62306 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNRPFP62306 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNRPFP62306 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.54■□□□□ 0.56
SNRPFP62306 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SNRPFP62306 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNRPFP62306 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNRPFP62306 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.54■□□□□ 0.56
SNRPFP62306 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNRPFP62306 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.54■□□□□ 0.56
SNRPFP62306 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SNRPFP62306 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SNRPFP62306 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNRPFP62306 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNRPFP62306 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNRPFP62306 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNRPFP62306 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNRPFP62306 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNRPFP62306 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNRPFP62306 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SNRPFP62306 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.53■□□□□ 0.56
SNRPFP62306 AC107918.2-201ENST00000530817 355 ntBASIC18.53■□□□□ 0.56
SNRPFP62306 AC005412.3-201ENST00000580309 715 ntBASIC18.53■□□□□ 0.56
SNRPFP62306 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.53■□□□□ 0.56
SNRPFP62306 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.53■□□□□ 0.56
SNRPFP62306 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SNRPFP62306 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNRPFP62306 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNRPFP62306 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNRPFP62306 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SNRPFP62306 AL353732.1-201ENST00000569618 1459 ntBASIC18.52■□□□□ 0.56
SNRPFP62306 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNRPFP62306 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.52■□□□□ 0.56
SNRPFP62306 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SNRPFP62306 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNRPFP62306 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNRPFP62306 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNRPFP62306 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNRPFP62306 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNRPFP62306 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SNRPFP62306 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNRPFP62306 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.52■□□□□ 0.56
SNRPFP62306 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNRPFP62306 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNRPFP62306 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNRPFP62306 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNRPFP62306 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.52■□□□□ 0.56
SNRPFP62306 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
SNRPFP62306 UNC93B6-202ENST00000528242 690 ntBASIC18.52■□□□□ 0.56
SNRPFP62306 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.52■□□□□ 0.56
SNRPFP62306 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SNRPFP62306 OR7E47P-204ENST00000575924 449 ntBASIC18.52■□□□□ 0.56
SNRPFP62306 MPDU1-223ENST00000582151 728 ntBASIC18.52■□□□□ 0.56
SNRPFP62306 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.52■□□□□ 0.56
SNRPFP62306 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNRPFP62306 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.52■□□□□ 0.56
SNRPFP62306 AC004790.2-201ENST00000623588 572 ntBASIC18.52■□□□□ 0.56
SNRPFP62306 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.52■□□□□ 0.56
SNRPFP62306 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNRPFP62306 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms