Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH8P55286 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH8P55286 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH8P55286 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH8P55286 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH8P55286 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.23■□□□□ 0.51
CDH8P55286 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH8P55286 AC002310.6-201ENST00000624451 1377 ntBASIC18.23■□□□□ 0.51
CDH8P55286 MIR574-201ENST00000385209 96 ntBASIC18.23■□□□□ 0.51
CDH8P55286 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.23■□□□□ 0.51
CDH8P55286 MIR940-201ENST00000401276 94 ntBASIC18.23■□□□□ 0.51
CDH8P55286 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.23■□□□□ 0.51
CDH8P55286 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH8P55286 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.23■□□□□ 0.51
CDH8P55286 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.23■□□□□ 0.51
CDH8P55286 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH8P55286 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH8P55286 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDH8P55286 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.23■□□□□ 0.51
CDH8P55286 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.23■□□□□ 0.51
CDH8P55286 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.23■□□□□ 0.51
CDH8P55286 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CDH8P55286 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDH8P55286 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.22■□□□□ 0.51
CDH8P55286 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.22■□□□□ 0.51
CDH8P55286 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDH8P55286 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH8P55286 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.22■□□□□ 0.51
CDH8P55286 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH8P55286 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH8P55286 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH8P55286 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH8P55286 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH8P55286 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.22■□□□□ 0.51
CDH8P55286 VN2R19P-201ENST00000442399 1052 ntBASIC18.22■□□□□ 0.51
CDH8P55286 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CDH8P55286 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.22■□□□□ 0.51
CDH8P55286 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.22■□□□□ 0.51
CDH8P55286 DUX4L17-201ENST00000557360 1267 ntBASIC18.22■□□□□ 0.51
CDH8P55286 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.22■□□□□ 0.51
CDH8P55286 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.22■□□□□ 0.51
CDH8P55286 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH8P55286 AC022211.2-201ENST00000585075 2527 ntBASIC18.22■□□□□ 0.51
CDH8P55286 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH8P55286 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.22■□□□□ 0.51
CDH8P55286 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH8P55286 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.22■□□□□ 0.51
CDH8P55286 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDH8P55286 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDH8P55286 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH8P55286 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH8P55286 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
CDH8P55286 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.21■□□□□ 0.51
CDH8P55286 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.21■□□□□ 0.51
CDH8P55286 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CDH8P55286 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH8P55286 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.21■□□□□ 0.51
CDH8P55286 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
CDH8P55286 CRYGEP-201ENST00000412192 528 ntBASIC18.21■□□□□ 0.51
CDH8P55286 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.21■□□□□ 0.51
CDH8P55286 KRT18P2-201ENST00000447938 1258 ntBASIC18.21■□□□□ 0.51
CDH8P55286 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CDH8P55286 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH8P55286 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDH8P55286 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDH8P55286 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CDH8P55286 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.21■□□□□ 0.51
CDH8P55286 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.21■□□□□ 0.51
CDH8P55286 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.5
CDH8P55286 OR6D1P-202ENST00000641007 5290 ntBASIC18.21■□□□□ 0.5
CDH8P55286 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
CDH8P55286 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.2■□□□□ 0.5
CDH8P55286 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.2■□□□□ 0.5
CDH8P55286 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH8P55286 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.2■□□□□ 0.5
CDH8P55286 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH8P55286 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH8P55286 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
CDH8P55286 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH8P55286 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH8P55286 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH8P55286 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.2■□□□□ 0.5
CDH8P55286 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH8P55286 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.2■□□□□ 0.5
CDH8P55286 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH8P55286 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CDH8P55286 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
CDH8P55286 IGLL3P-201ENST00000412472 434 ntBASIC18.2■□□□□ 0.5
CDH8P55286 PRSS29P-201ENST00000440800 595 ntBASIC18.2■□□□□ 0.5
CDH8P55286 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.2■□□□□ 0.5
CDH8P55286 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.2■□□□□ 0.5
CDH8P55286 AC124947.2-201ENST00000547118 1133 ntBASIC18.2■□□□□ 0.5
CDH8P55286 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.2■□□□□ 0.5
CDH8P55286 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH8P55286 AC140113.2-201ENST00000604370 208 ntBASIC18.2■□□□□ 0.5
CDH8P55286 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH8P55286 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.2■□□□□ 0.5
CDH8P55286 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH8P55286 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.2■□□□□ 0.5
CDH8P55286 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms