Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCKAP1LP55160 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.67■□□□□ 0.58
NCKAP1LP55160 AC106820.2-201ENST00000563775 3264 ntBASIC18.67■□□□□ 0.58
NCKAP1LP55160 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NCKAP1LP55160 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
NCKAP1LP55160 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
NCKAP1LP55160 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.67■□□□□ 0.58
NCKAP1LP55160 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCKAP1LP55160 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NCKAP1LP55160 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.67■□□□□ 0.58
NCKAP1LP55160 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.67■□□□□ 0.58
NCKAP1LP55160 MIR574-201ENST00000385209 96 ntBASIC18.67■□□□□ 0.58
NCKAP1LP55160 AC007967.2-201ENST00000432613 625 ntBASIC18.67■□□□□ 0.58
NCKAP1LP55160 FAM185BP-201ENST00000443595 716 ntBASIC18.67■□□□□ 0.58
NCKAP1LP55160 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.67■□□□□ 0.58
NCKAP1LP55160 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.67■□□□□ 0.58
NCKAP1LP55160 ACTL9-202ENST00000612068 1252 ntBASIC18.67■□□□□ 0.58
NCKAP1LP55160 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
NCKAP1LP55160 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCKAP1LP55160 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.67■□□□□ 0.58
NCKAP1LP55160 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCKAP1LP55160 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCKAP1LP55160 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCKAP1LP55160 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.67■□□□□ 0.58
NCKAP1LP55160 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.67■□□□□ 0.58
NCKAP1LP55160 AC012313.1-201ENST00000593393 3059 ntBASIC18.67■□□□□ 0.58
NCKAP1LP55160 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCKAP1LP55160 AL121761.2-201ENST00000598007 1648 ntBASIC18.67■□□□□ 0.58
NCKAP1LP55160 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCKAP1LP55160 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NCKAP1LP55160 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
NCKAP1LP55160 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCKAP1LP55160 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCKAP1LP55160 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NCKAP1LP55160 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCKAP1LP55160 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
NCKAP1LP55160 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCKAP1LP55160 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCKAP1LP55160 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NCKAP1LP55160 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCKAP1LP55160 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCKAP1LP55160 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.66■□□□□ 0.58
NCKAP1LP55160 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
NCKAP1LP55160 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
NCKAP1LP55160 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
NCKAP1LP55160 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.66■□□□□ 0.58
NCKAP1LP55160 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.66■□□□□ 0.58
NCKAP1LP55160 AL591424.1-201ENST00000442569 1213 ntBASIC18.66■□□□□ 0.58
NCKAP1LP55160 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.66■□□□□ 0.58
NCKAP1LP55160 CXCL1P1-201ENST00000502804 216 ntBASIC18.66■□□□□ 0.58
NCKAP1LP55160 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.66■□□□□ 0.58
NCKAP1LP55160 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.66■□□□□ 0.58
NCKAP1LP55160 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCKAP1LP55160 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.66■□□□□ 0.58
NCKAP1LP55160 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.66■□□□□ 0.58
NCKAP1LP55160 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCKAP1LP55160 AC027601.4-201ENST00000611259 610 ntBASIC18.66■□□□□ 0.58
NCKAP1LP55160 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCKAP1LP55160 FAM197Y3-203ENST00000618346 717 ntBASIC18.66■□□□□ 0.58
NCKAP1LP55160 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCKAP1LP55160 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
NCKAP1LP55160 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
NCKAP1LP55160 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.66■□□□□ 0.58
NCKAP1LP55160 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.66■□□□□ 0.58
NCKAP1LP55160 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCKAP1LP55160 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NCKAP1LP55160 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.66■□□□□ 0.58
NCKAP1LP55160 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCKAP1LP55160 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NCKAP1LP55160 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCKAP1LP55160 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.65■□□□□ 0.58
NCKAP1LP55160 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCKAP1LP55160 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NCKAP1LP55160 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCKAP1LP55160 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
NCKAP1LP55160 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NCKAP1LP55160 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NCKAP1LP55160 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NCKAP1LP55160 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCKAP1LP55160 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCKAP1LP55160 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NCKAP1LP55160 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.65■□□□□ 0.58
NCKAP1LP55160 KRT18P2-201ENST00000447938 1258 ntBASIC18.65■□□□□ 0.58
NCKAP1LP55160 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.65■□□□□ 0.58
NCKAP1LP55160 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.65■□□□□ 0.58
NCKAP1LP55160 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
NCKAP1LP55160 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.65■□□□□ 0.58
NCKAP1LP55160 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.65■□□□□ 0.58
NCKAP1LP55160 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.65■□□□□ 0.58
NCKAP1LP55160 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
NCKAP1LP55160 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.65■□□□□ 0.58
NCKAP1LP55160 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.65■□□□□ 0.58
NCKAP1LP55160 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.65■□□□□ 0.58
NCKAP1LP55160 AC010507.1-201ENST00000633895 436 ntBASIC18.65■□□□□ 0.58
NCKAP1LP55160 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
NCKAP1LP55160 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NCKAP1LP55160 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NCKAP1LP55160 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.65■□□□□ 0.58
NCKAP1LP55160 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NCKAP1LP55160 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms