Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
RAD23BP54727 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.29■□□□□ 0.52
RAD23BP54727 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.29■□□□□ 0.52
RAD23BP54727 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RAD23BP54727 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAD23BP54727 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RAD23BP54727 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.29■□□□□ 0.52
RAD23BP54727 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAD23BP54727 PTCHD3P3-201ENST00000403073 906 ntBASIC18.29■□□□□ 0.52
RAD23BP54727 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.29■□□□□ 0.52
RAD23BP54727 AC026396.1-201ENST00000419388 421 ntBASIC18.29■□□□□ 0.52
RAD23BP54727 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAD23BP54727 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.29■□□□□ 0.52
RAD23BP54727 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.29■□□□□ 0.52
RAD23BP54727 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
RAD23BP54727 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAD23BP54727 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAD23BP54727 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAD23BP54727 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAD23BP54727 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAD23BP54727 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RAD23BP54727 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAD23BP54727 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAD23BP54727 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.29■□□□□ 0.52
RAD23BP54727 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RAD23BP54727 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAD23BP54727 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAD23BP54727 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RAD23BP54727 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RAD23BP54727 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.28■□□□□ 0.52
RAD23BP54727 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.28■□□□□ 0.52
RAD23BP54727 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
RAD23BP54727 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAD23BP54727 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RAD23BP54727 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAD23BP54727 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RAD23BP54727 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAD23BP54727 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAD23BP54727 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAD23BP54727 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAD23BP54727 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAD23BP54727 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.28■□□□□ 0.52
RAD23BP54727 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAD23BP54727 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.28■□□□□ 0.52
RAD23BP54727 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
RAD23BP54727 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.28■□□□□ 0.52
RAD23BP54727 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.28■□□□□ 0.52
RAD23BP54727 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.28■□□□□ 0.52
RAD23BP54727 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RAD23BP54727 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.28■□□□□ 0.52
RAD23BP54727 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.28■□□□□ 0.52
RAD23BP54727 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.28■□□□□ 0.52
RAD23BP54727 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.28■□□□□ 0.52
RAD23BP54727 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAD23BP54727 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.28■□□□□ 0.52
RAD23BP54727 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RAD23BP54727 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RAD23BP54727 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.28■□□□□ 0.52
RAD23BP54727 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.28■□□□□ 0.52
RAD23BP54727 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RAD23BP54727 FRMD8P1-201ENST00000440433 1524 ntBASIC18.28■□□□□ 0.52
RAD23BP54727 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.28■□□□□ 0.52
RAD23BP54727 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.28■□□□□ 0.52
RAD23BP54727 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RAD23BP54727 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
RAD23BP54727 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAD23BP54727 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.27■□□□□ 0.52
RAD23BP54727 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAD23BP54727 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RAD23BP54727 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
RAD23BP54727 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RAD23BP54727 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RAD23BP54727 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAD23BP54727 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAD23BP54727 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAD23BP54727 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAD23BP54727 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.27■□□□□ 0.52
RAD23BP54727 AC011270.2-201ENST00000624293 2550 ntBASIC18.27■□□□□ 0.52
RAD23BP54727 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
RAD23BP54727 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAD23BP54727 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAD23BP54727 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.27■□□□□ 0.52
RAD23BP54727 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.27■□□□□ 0.52
RAD23BP54727 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.27■□□□□ 0.52
RAD23BP54727 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.27■□□□□ 0.52
RAD23BP54727 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
RAD23BP54727 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.27■□□□□ 0.52
RAD23BP54727 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.27■□□□□ 0.52
RAD23BP54727 AC136632.2-201ENST00000512891 861 ntBASIC18.27■□□□□ 0.52
RAD23BP54727 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.27■□□□□ 0.52
RAD23BP54727 AL356488.2-201ENST00000602755 427 ntBASIC18.27■□□□□ 0.52
RAD23BP54727 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RAD23BP54727 AC116407.3-201ENST00000623905 1129 ntBASIC18.27■□□□□ 0.52
RAD23BP54727 AL805961.1-202ENST00000641562 540 ntBASIC18.27■□□□□ 0.52
RAD23BP54727 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.27■□□□□ 0.52
RAD23BP54727 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RAD23BP54727 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RAD23BP54727 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
RAD23BP54727 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RAD23BP54727 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms