Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LBX1P52954 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.03■□□□□ 0.64
LBX1P52954 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LBX1P52954 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.02■□□□□ 0.64
LBX1P52954 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
LBX1P52954 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC19.02■□□□□ 0.64
LBX1P52954 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.02■□□□□ 0.64
LBX1P52954 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LBX1P52954 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LBX1P52954 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LBX1P52954 GZMB-202ENST00000382540 816 ntTSL 5 BASIC19.02■□□□□ 0.64
LBX1P52954 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
LBX1P52954 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC19.02■□□□□ 0.64
LBX1P52954 BCRP2-202ENST00000447763 634 ntBASIC19.02■□□□□ 0.64
LBX1P52954 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC19.02■□□□□ 0.64
LBX1P52954 SERBP1P3-201ENST00000459980 809 ntBASIC19.02■□□□□ 0.64
LBX1P52954 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC19.02■□□□□ 0.64
LBX1P52954 BCRP6-201ENST00000510112 632 ntBASIC19.02■□□□□ 0.64
LBX1P52954 BCRP7-201ENST00000511549 544 ntBASIC19.02■□□□□ 0.64
LBX1P52954 PRYP6-201ENST00000514804 343 ntBASIC19.02■□□□□ 0.64
LBX1P52954 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC19.02■□□□□ 0.64
LBX1P52954 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC19.02■□□□□ 0.64
LBX1P52954 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC19.02■□□□□ 0.64
LBX1P52954 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC19.02■□□□□ 0.64
LBX1P52954 RRP7BP-205ENST00000566851 833 ntBASIC19.02■□□□□ 0.64
LBX1P52954 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LBX1P52954 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC19.02■□□□□ 0.64
LBX1P52954 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC19.02■□□□□ 0.64
LBX1P52954 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.02■□□□□ 0.64
LBX1P52954 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC19.02■□□□□ 0.64
LBX1P52954 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
LBX1P52954 PCDHAC2-203ENST00000615316 3011 ntBASIC19.02■□□□□ 0.63
LBX1P52954 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
LBX1P52954 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
LBX1P52954 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
LBX1P52954 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.01■□□□□ 0.63
LBX1P52954 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC19.01■□□□□ 0.63
LBX1P52954 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
LBX1P52954 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC19.01■□□□□ 0.63
LBX1P52954 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
LBX1P52954 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
LBX1P52954 RBM39-205ENST00000397370 612 ntTSL 2 BASIC19.01■□□□□ 0.63
LBX1P52954 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LBX1P52954 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LBX1P52954 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LBX1P52954 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LBX1P52954 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC19.01■□□□□ 0.63
LBX1P52954 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC19.01■□□□□ 0.63
LBX1P52954 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC19.01■□□□□ 0.63
LBX1P52954 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC19.01■□□□□ 0.63
LBX1P52954 AC104596.2-201ENST00000512793 793 ntBASIC19.01■□□□□ 0.63
LBX1P52954 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC19.01■□□□□ 0.63
LBX1P52954 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC19.01■□□□□ 0.63
LBX1P52954 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC19.01■□□□□ 0.63
LBX1P52954 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC19.01■□□□□ 0.63
LBX1P52954 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
LBX1P52954 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC19.01■□□□□ 0.63
LBX1P52954 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC19.01■□□□□ 0.63
LBX1P52954 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.01■□□□□ 0.63
LBX1P52954 ABBA01031663.1-201ENST00000635630 790 ntBASIC19.01■□□□□ 0.63
LBX1P52954 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LBX1P52954 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LBX1P52954 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
LBX1P52954 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LBX1P52954 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LBX1P52954 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.01■□□□□ 0.63
LBX1P52954 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.01■□□□□ 0.63
LBX1P52954 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.01■□□□□ 0.63
LBX1P52954 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
LBX1P52954 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19■□□□□ 0.63
LBX1P52954 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC19■□□□□ 0.63
LBX1P52954 AC092978.1-202ENST00000637590 1327 ntBASIC19■□□□□ 0.63
LBX1P52954 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19■□□□□ 0.63
LBX1P52954 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19■□□□□ 0.63
LBX1P52954 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19■□□□□ 0.63
LBX1P52954 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LBX1P52954 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC19■□□□□ 0.63
LBX1P52954 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
LBX1P52954 AL662890.1-201ENST00000396818 632 ntBASIC19■□□□□ 0.63
LBX1P52954 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC19■□□□□ 0.63
LBX1P52954 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC19■□□□□ 0.63
LBX1P52954 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC19■□□□□ 0.63
LBX1P52954 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LBX1P52954 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC19■□□□□ 0.63
LBX1P52954 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LBX1P52954 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC19■□□□□ 0.63
LBX1P52954 AL033527.5-202ENST00000641632 1098 ntBASIC19■□□□□ 0.63
LBX1P52954 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LBX1P52954 EGFEM1P-202ENST00000431685 1563 ntBASIC19■□□□□ 0.63
LBX1P52954 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19■□□□□ 0.63
LBX1P52954 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LBX1P52954 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LBX1P52954 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LBX1P52954 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
LBX1P52954 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
LBX1P52954 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LBX1P52954 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
LBX1P52954 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19■□□□□ 0.63
LBX1P52954 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19■□□□□ 0.63
LBX1P52954 ANO7L1-203ENST00000602586 1720 ntBASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms