Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 PTCHD3P3-201ENST00000403073 906 ntBASIC18.04■□□□□ 0.48
TUBP50607 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TUBP50607 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.04■□□□□ 0.48
TUBP50607 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
TUBP50607 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.04■□□□□ 0.48
TUBP50607 GGTLC5P-201ENST00000617623 998 ntBASIC18.04■□□□□ 0.48
TUBP50607 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TUBP50607 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.04■□□□□ 0.48
TUBP50607 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TUBP50607 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TUBP50607 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TUBP50607 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.04■□□□□ 0.48
TUBP50607 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TUBP50607 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TUBP50607 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.04■□□□□ 0.48
TUBP50607 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TUBP50607 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.03■□□□□ 0.48
TUBP50607 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TUBP50607 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TUBP50607 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TUBP50607 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.03■□□□□ 0.48
TUBP50607 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
TUBP50607 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TUBP50607 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TUBP50607 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TUBP50607 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TUBP50607 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TUBP50607 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TUBP50607 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
TUBP50607 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TUBP50607 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TUBP50607 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.03■□□□□ 0.48
TUBP50607 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.03■□□□□ 0.48
TUBP50607 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TUBP50607 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
TUBP50607 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.03■□□□□ 0.48
TUBP50607 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.03■□□□□ 0.48
TUBP50607 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.03■□□□□ 0.48
TUBP50607 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.03■□□□□ 0.48
TUBP50607 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
TUBP50607 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.03■□□□□ 0.48
TUBP50607 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TUBP50607 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TUBP50607 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TUBP50607 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
TUBP50607 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TUBP50607 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TUBP50607 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.03■□□□□ 0.48
TUBP50607 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TUBP50607 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TUBP50607 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.03■□□□□ 0.48
TUBP50607 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TUBP50607 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TUBP50607 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.02■□□□□ 0.48
TUBP50607 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TUBP50607 AL590787.1-201ENST00000568856 1315 ntBASIC18.02■□□□□ 0.48
TUBP50607 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TUBP50607 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TUBP50607 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TUBP50607 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
TUBP50607 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TUBP50607 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
TUBP50607 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TUBP50607 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
TUBP50607 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
TUBP50607 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.02■□□□□ 0.48
TUBP50607 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.02■□□□□ 0.48
TUBP50607 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.02■□□□□ 0.48
TUBP50607 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.02■□□□□ 0.48
TUBP50607 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.02■□□□□ 0.48
TUBP50607 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.02■□□□□ 0.48
TUBP50607 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.02■□□□□ 0.48
TUBP50607 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.02■□□□□ 0.48
TUBP50607 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.02■□□□□ 0.48
TUBP50607 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.02■□□□□ 0.48
TUBP50607 AC040169.1-201ENST00000565382 521 ntBASIC18.02■□□□□ 0.48
TUBP50607 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.02■□□□□ 0.48
TUBP50607 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.02■□□□□ 0.48
TUBP50607 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TUBP50607 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.02■□□□□ 0.48
TUBP50607 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.02■□□□□ 0.48
TUBP50607 AC064836.3-201ENST00000607928 673 ntBASIC18.02■□□□□ 0.48
TUBP50607 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
TUBP50607 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
TUBP50607 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TUBP50607 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TUBP50607 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.02■□□□□ 0.47
TUBP50607 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TUBP50607 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.02■□□□□ 0.47
TUBP50607 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TUBP50607 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TUBP50607 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
TUBP50607 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.02■□□□□ 0.47
TUBP50607 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
TUBP50607 AL162727.3-201ENST00000635661 2787 ntBASIC18.02■□□□□ 0.47
TUBP50607 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.02■□□□□ 0.47
TUBP50607 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TUBP50607 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TUBP50607 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TUBP50607 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms