Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.06■□□□□ 0.64
CENPFP49454 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC19.06■□□□□ 0.64
CENPFP49454 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CENPFP49454 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CENPFP49454 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CENPFP49454 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CENPFP49454 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.06■□□□□ 0.64
CENPFP49454 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CENPFP49454 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CENPFP49454 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CENPFP49454 SLC22A20-204ENST00000530038 1673 ntBASIC19.05■□□□□ 0.64
CENPFP49454 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CENPFP49454 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CENPFP49454 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.05■□□□□ 0.64
CENPFP49454 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CENPFP49454 BNIP3P42-201ENST00000454982 569 ntBASIC19.05■□□□□ 0.64
CENPFP49454 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC19.05■□□□□ 0.64
CENPFP49454 MIR3909-201ENST00000579518 119 ntBASIC19.05■□□□□ 0.64
CENPFP49454 BNIP3P29-201ENST00000598302 571 ntBASIC19.05■□□□□ 0.64
CENPFP49454 AC011447.5-201ENST00000616168 564 ntBASIC19.05■□□□□ 0.64
CENPFP49454 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CENPFP49454 BTBD7P1-201ENST00000447253 1453 ntBASIC19.05■□□□□ 0.64
CENPFP49454 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CENPFP49454 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CENPFP49454 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CENPFP49454 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CENPFP49454 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
CENPFP49454 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
CENPFP49454 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC19.05■□□□□ 0.64
CENPFP49454 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CENPFP49454 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.05■□□□□ 0.64
CENPFP49454 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CENPFP49454 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CENPFP49454 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CENPFP49454 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.04■□□□□ 0.64
CENPFP49454 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CENPFP49454 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC19.04■□□□□ 0.64
CENPFP49454 GNAQP1-201ENST00000444815 1067 ntBASIC19.04■□□□□ 0.64
CENPFP49454 IGHV3-52-201ENST00000519770 353 ntBASIC19.04■□□□□ 0.64
CENPFP49454 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CENPFP49454 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CENPFP49454 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CENPFP49454 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.04■□□□□ 0.64
CENPFP49454 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CENPFP49454 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
CENPFP49454 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CENPFP49454 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
CENPFP49454 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CENPFP49454 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.04■□□□□ 0.64
CENPFP49454 AL355312.1-201ENST00000407115 2176 ntBASIC19.04■□□□□ 0.64
CENPFP49454 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.04■□□□□ 0.64
CENPFP49454 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC19.04■□□□□ 0.64
CENPFP49454 AC135586.1-201ENST00000539323 574 ntBASIC19.04■□□□□ 0.64
CENPFP49454 AL844908.2-201ENST00000609461 460 ntBASIC19.04■□□□□ 0.64
CENPFP49454 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CENPFP49454 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CENPFP49454 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CENPFP49454 HAUS4P1-201ENST00000406739 1145 ntBASIC19.03■□□□□ 0.64
CENPFP49454 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.03■□□□□ 0.64
CENPFP49454 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CENPFP49454 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CENPFP49454 AC073592.8-201ENST00000624126 511 ntBASIC19.03■□□□□ 0.64
CENPFP49454 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
CENPFP49454 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CENPFP49454 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC19.03■□□□□ 0.64
CENPFP49454 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CENPFP49454 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CENPFP49454 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
CENPFP49454 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.03■□□□□ 0.64
CENPFP49454 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CENPFP49454 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.03■□□□□ 0.64
CENPFP49454 DFFBP1-201ENST00000433250 979 ntBASIC19.03■□□□□ 0.64
CENPFP49454 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.03■□□□□ 0.64
CENPFP49454 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC19.03■□□□□ 0.64
CENPFP49454 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CENPFP49454 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CENPFP49454 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CENPFP49454 KRT8P44-201ENST00000441609 1350 ntBASIC19.03■□□□□ 0.64
CENPFP49454 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CENPFP49454 AC087499.5-201ENST00000452760 1342 ntBASIC19.03■□□□□ 0.64
CENPFP49454 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC19.02■□□□□ 0.64
CENPFP49454 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC19.02■□□□□ 0.64
CENPFP49454 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CENPFP49454 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CENPFP49454 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
CENPFP49454 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CENPFP49454 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
CENPFP49454 RASL12-203ENST00000434605 982 ntTSL 2 BASIC19.02■□□□□ 0.64
CENPFP49454 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC19.02■□□□□ 0.64
CENPFP49454 ORC6-206ENST00000568364 888 ntTSL 5 BASIC19.02■□□□□ 0.64
CENPFP49454 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CENPFP49454 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
CENPFP49454 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CENPFP49454 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CENPFP49454 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.02■□□□□ 0.64
CENPFP49454 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CENPFP49454 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.02■□□□□ 0.63
CENPFP49454 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CENPFP49454 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
CENPFP49454 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms