Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC012317.2-201ENST00000623305 2251 ntBASIC18.95■□□□□ 0.62
HTTP42858 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
HTTP42858 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HTTP42858 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HTTP42858 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HTTP42858 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.94■□□□□ 0.62
HTTP42858 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.94■□□□□ 0.62
HTTP42858 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.94■□□□□ 0.62
HTTP42858 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
HTTP42858 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HTTP42858 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HTTP42858 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HTTP42858 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HTTP42858 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HTTP42858 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HTTP42858 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HTTP42858 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HTTP42858 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HTTP42858 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HTTP42858 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
HTTP42858 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HTTP42858 AC093004.1-201ENST00000508850 424 ntBASIC18.94■□□□□ 0.62
HTTP42858 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.94■□□□□ 0.62
HTTP42858 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HTTP42858 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
HTTP42858 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HTTP42858 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
HTTP42858 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
HTTP42858 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.94■□□□□ 0.62
HTTP42858 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.94■□□□□ 0.62
HTTP42858 ACTBP11-201ENST00000436287 1126 ntBASIC18.94■□□□□ 0.62
HTTP42858 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.94■□□□□ 0.62
HTTP42858 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HTTP42858 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HTTP42858 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
HTTP42858 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HTTP42858 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
HTTP42858 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HTTP42858 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HTTP42858 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HTTP42858 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HTTP42858 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.93■□□□□ 0.62
HTTP42858 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.93■□□□□ 0.62
HTTP42858 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HTTP42858 TUBB1P2-201ENST00000422712 1306 ntBASIC18.93■□□□□ 0.62
HTTP42858 TUBB1P1-201ENST00000503144 1300 ntBASIC18.93■□□□□ 0.62
HTTP42858 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC18.93■□□□□ 0.62
HTTP42858 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
HTTP42858 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HTTP42858 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HTTP42858 AC099548.2-209ENST00000480264 625 ntBASIC18.93■□□□□ 0.62
HTTP42858 USP32P1-208ENST00000506594 1164 ntBASIC18.93■□□□□ 0.62
HTTP42858 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC18.93■□□□□ 0.62
HTTP42858 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.93■□□□□ 0.62
HTTP42858 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.93■□□□□ 0.62
HTTP42858 PFAS-212ENST00000625942 396 ntTSL 5 BASIC18.93■□□□□ 0.62
HTTP42858 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
HTTP42858 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.93■□□□□ 0.62
HTTP42858 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HTTP42858 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HTTP42858 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
HTTP42858 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.93■□□□□ 0.62
HTTP42858 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HTTP42858 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.93■□□□□ 0.62
HTTP42858 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HTTP42858 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
HTTP42858 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC18.93■□□□□ 0.62
HTTP42858 LITAF-210ENST00000571976 548 ntTSL 2 BASIC18.93■□□□□ 0.62
HTTP42858 LITAF-214ENST00000574703 486 ntTSL 2 BASIC18.93■□□□□ 0.62
HTTP42858 AL133215.2-201ENST00000609242 977 ntBASIC18.93■□□□□ 0.62
HTTP42858 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HTTP42858 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HTTP42858 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.93■□□□□ 0.62
HTTP42858 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
HTTP42858 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.92■□□□□ 0.62
HTTP42858 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HTTP42858 AP005482.1-201ENST00000563722 1273 ntBASIC18.92■□□□□ 0.62
HTTP42858 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HTTP42858 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HTTP42858 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HTTP42858 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
HTTP42858 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.92■□□□□ 0.62
HTTP42858 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
HTTP42858 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HTTP42858 LINC00895-201ENST00000629028 1637 ntBASIC18.92■□□□□ 0.62
HTTP42858 KRT223P-202ENST00000449164 1292 ntBASIC18.92■□□□□ 0.62
HTTP42858 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC18.92■□□□□ 0.62
HTTP42858 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.92■□□□□ 0.62
HTTP42858 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.92■□□□□ 0.62
HTTP42858 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HTTP42858 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HTTP42858 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HTTP42858 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HTTP42858 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.92■□□□□ 0.62
HTTP42858 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.92■□□□□ 0.62
HTTP42858 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HTTP42858 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.92■□□□□ 0.62
HTTP42858 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HTTP42858 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HTTP42858 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms