Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PRPHP41219 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
PRPHP41219 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRPHP41219 AC006504.4-201ENST00000592118 1568 ntBASIC19.32■□□□□ 0.68
PRPHP41219 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRPHP41219 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRPHP41219 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.31■□□□□ 0.68
PRPHP41219 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRPHP41219 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.31■□□□□ 0.68
PRPHP41219 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRPHP41219 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRPHP41219 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRPHP41219 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.31■□□□□ 0.68
PRPHP41219 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.31■□□□□ 0.68
PRPHP41219 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.31■□□□□ 0.68
PRPHP41219 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.31■□□□□ 0.68
PRPHP41219 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.31■□□□□ 0.68
PRPHP41219 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.31■□□□□ 0.68
PRPHP41219 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC19.31■□□□□ 0.68
PRPHP41219 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.31■□□□□ 0.68
PRPHP41219 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.31■□□□□ 0.68
PRPHP41219 AC104692.2-201ENST00000603054 253 ntBASIC19.31■□□□□ 0.68
PRPHP41219 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PRPHP41219 AL031008.1-201ENST00000619963 541 ntBASIC19.31■□□□□ 0.68
PRPHP41219 AC008735.5-201ENST00000623544 497 ntBASIC19.31■□□□□ 0.68
PRPHP41219 AF228730.7-201ENST00000641842 219 ntBASIC19.31■□□□□ 0.68
PRPHP41219 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRPHP41219 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
PRPHP41219 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRPHP41219 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRPHP41219 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRPHP41219 AC009053.2-201ENST00000563701 2365 ntBASIC19.3■□□□□ 0.68
PRPHP41219 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRPHP41219 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRPHP41219 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
PRPHP41219 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRPHP41219 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.3■□□□□ 0.68
PRPHP41219 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRPHP41219 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRPHP41219 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
PRPHP41219 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRPHP41219 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PRPHP41219 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRPHP41219 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.3■□□□□ 0.68
PRPHP41219 PTCHD3P3-201ENST00000403073 906 ntBASIC19.3■□□□□ 0.68
PRPHP41219 HNRNPDP1-201ENST00000439535 754 ntBASIC19.3■□□□□ 0.68
PRPHP41219 AF186996.4-201ENST00000467186 377 ntBASIC19.3■□□□□ 0.68
PRPHP41219 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.3■□□□□ 0.68
PRPHP41219 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.3■□□□□ 0.68
PRPHP41219 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.3■□□□□ 0.68
PRPHP41219 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.3■□□□□ 0.68
PRPHP41219 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.3■□□□□ 0.68
PRPHP41219 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRPHP41219 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRPHP41219 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.3■□□□□ 0.68
PRPHP41219 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRPHP41219 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRPHP41219 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRPHP41219 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRPHP41219 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.3■□□□□ 0.68
PRPHP41219 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.3■□□□□ 0.68
PRPHP41219 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PRPHP41219 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRPHP41219 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRPHP41219 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PRPHP41219 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PRPHP41219 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.29■□□□□ 0.68
PRPHP41219 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.29■□□□□ 0.68
PRPHP41219 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PRPHP41219 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.29■□□□□ 0.68
PRPHP41219 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.29■□□□□ 0.68
PRPHP41219 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRPHP41219 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRPHP41219 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.29■□□□□ 0.68
PRPHP41219 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.29■□□□□ 0.68
PRPHP41219 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.29■□□□□ 0.68
PRPHP41219 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.29■□□□□ 0.68
PRPHP41219 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRPHP41219 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.29■□□□□ 0.68
PRPHP41219 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.29■□□□□ 0.68
PRPHP41219 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.29■□□□□ 0.68
PRPHP41219 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRPHP41219 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PRPHP41219 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PRPHP41219 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PRPHP41219 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRPHP41219 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRPHP41219 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRPHP41219 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.29■□□□□ 0.68
PRPHP41219 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRPHP41219 AL021920.2-201ENST00000624828 1351 ntBASIC19.29■□□□□ 0.68
PRPHP41219 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRPHP41219 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PRPHP41219 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PRPHP41219 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.28■□□□□ 0.68
PRPHP41219 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.28■□□□□ 0.68
PRPHP41219 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PRPHP41219 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PRPHP41219 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.28■□□□□ 0.68
PRPHP41219 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms