Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 NME2P1-201ENST00000426182 414 ntBASIC21.61■■□□□ 1.05
ATP6V1AP38606 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC21.61■■□□□ 1.05
ATP6V1AP38606 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC21.61■■□□□ 1.05
ATP6V1AP38606 AC018529.1-201ENST00000613063 361 ntBASIC21.61■■□□□ 1.05
ATP6V1AP38606 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.61■■□□□ 1.05
ATP6V1AP38606 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP6V1AP38606 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ATP6V1AP38606 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC21.61■■□□□ 1.05
ATP6V1AP38606 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
ATP6V1AP38606 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.61■■□□□ 1.05
ATP6V1AP38606 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
ATP6V1AP38606 HARS-204ENST00000438307 1789 ntTSL 2 BASIC21.61■■□□□ 1.05
ATP6V1AP38606 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP6V1AP38606 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP6V1AP38606 NME9-203ENST00000383180 2133 ntTSL 2 BASIC21.61■■□□□ 1.05
ATP6V1AP38606 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP6V1AP38606 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP6V1AP38606 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
ATP6V1AP38606 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP6V1AP38606 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATP6V1AP38606 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.6■■□□□ 1.05
ATP6V1AP38606 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP6V1AP38606 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
ATP6V1AP38606 OR8S1-201ENST00000310194 1080 ntBASIC21.6■■□□□ 1.05
ATP6V1AP38606 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP6V1AP38606 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP6V1AP38606 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATP6V1AP38606 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATP6V1AP38606 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC21.6■■□□□ 1.05
ATP6V1AP38606 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC21.6■■□□□ 1.05
ATP6V1AP38606 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
ATP6V1AP38606 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC21.6■■□□□ 1.05
ATP6V1AP38606 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATP6V1AP38606 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC21.6■■□□□ 1.05
ATP6V1AP38606 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATP6V1AP38606 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP6V1AP38606 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP6V1AP38606 ABALON-201ENST00000629058 1903 ntBASIC21.6■■□□□ 1.05
ATP6V1AP38606 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATP6V1AP38606 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
ATP6V1AP38606 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP6V1AP38606 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP6V1AP38606 AL355312.1-201ENST00000407115 2176 ntBASIC21.6■■□□□ 1.05
ATP6V1AP38606 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATP6V1AP38606 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP6V1AP38606 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP6V1AP38606 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP6V1AP38606 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ATP6V1AP38606 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP6V1AP38606 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ATP6V1AP38606 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP6V1AP38606 RN7SL692P-201ENST00000464677 288 ntBASIC21.59■■□□□ 1.05
ATP6V1AP38606 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
ATP6V1AP38606 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ATP6V1AP38606 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC21.59■■□□□ 1.05
ATP6V1AP38606 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
ATP6V1AP38606 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC21.59■■□□□ 1.05
ATP6V1AP38606 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ATP6V1AP38606 AC022144.1-201ENST00000602255 1580 ntBASIC21.59■■□□□ 1.05
ATP6V1AP38606 AC003101.2-201ENST00000612557 442 ntBASIC21.59■■□□□ 1.05
ATP6V1AP38606 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.59■■□□□ 1.05
ATP6V1AP38606 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ATP6V1AP38606 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP6V1AP38606 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP6V1AP38606 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP6V1AP38606 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ATP6V1AP38606 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC21.58■■□□□ 1.05
ATP6V1AP38606 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ATP6V1AP38606 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
ATP6V1AP38606 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP6V1AP38606 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP6V1AP38606 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
ATP6V1AP38606 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
ATP6V1AP38606 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP6V1AP38606 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ATP6V1AP38606 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP6V1AP38606 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ATP6V1AP38606 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC21.58■■□□□ 1.05
ATP6V1AP38606 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC21.58■■□□□ 1.05
ATP6V1AP38606 AC142381.1-201ENST00000426099 345 ntBASIC21.58■■□□□ 1.05
ATP6V1AP38606 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC21.58■■□□□ 1.05
ATP6V1AP38606 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ATP6V1AP38606 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ATP6V1AP38606 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC21.58■■□□□ 1.05
ATP6V1AP38606 RARRES2P9-201ENST00000565168 469 ntBASIC21.58■■□□□ 1.05
ATP6V1AP38606 AC004233.3-201ENST00000607794 1269 ntBASIC21.58■■□□□ 1.05
ATP6V1AP38606 SPDYE12P-201ENST00000618416 771 ntBASIC21.58■■□□□ 1.05
ATP6V1AP38606 SRP9-204ENST00000619790 377 ntTSL 2 BASIC21.58■■□□□ 1.05
ATP6V1AP38606 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
ATP6V1AP38606 AP001350.2-201ENST00000625104 1094 ntBASIC21.58■■□□□ 1.05
ATP6V1AP38606 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ATP6V1AP38606 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC21.58■■□□□ 1.04
ATP6V1AP38606 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC21.58■■□□□ 1.04
ATP6V1AP38606 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ATP6V1AP38606 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ATP6V1AP38606 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ATP6V1AP38606 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC21.58■■□□□ 1.04
ATP6V1AP38606 AC004408.2-201ENST00000623613 2777 ntBASIC21.58■■□□□ 1.04
ATP6V1AP38606 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ATP6V1AP38606 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms