Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 CETN4P-206ENST00000642099 2168 ntBASIC23.82■■□□□ 1.4
CPS1P31327 AL023806.1-201ENST00000603994 1649 ntBASIC23.82■■□□□ 1.4
CPS1P31327 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
CPS1P31327 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC23.82■■□□□ 1.4
CPS1P31327 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC23.82■■□□□ 1.4
CPS1P31327 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CPS1P31327 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
CPS1P31327 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC23.82■■□□□ 1.4
CPS1P31327 AP3S2-216ENST00000617003 1561 ntBASIC23.82■■□□□ 1.4
CPS1P31327 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CPS1P31327 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CPS1P31327 AC016027.1-202ENST00000607927 1699 ntBASIC23.81■■□□□ 1.4
CPS1P31327 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC23.81■■□□□ 1.4
CPS1P31327 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CPS1P31327 AL353732.1-201ENST00000569618 1459 ntBASIC23.81■■□□□ 1.4
CPS1P31327 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CPS1P31327 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CPS1P31327 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CPS1P31327 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
CPS1P31327 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC23.81■■□□□ 1.4
CPS1P31327 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CPS1P31327 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC23.81■■□□□ 1.4
CPS1P31327 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CPS1P31327 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
CPS1P31327 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC23.81■■□□□ 1.4
CPS1P31327 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC23.81■■□□□ 1.4
CPS1P31327 MIR6869-201ENST00000619434 62 ntBASIC23.81■■□□□ 1.4
CPS1P31327 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CPS1P31327 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC23.81■■□□□ 1.4
CPS1P31327 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC23.81■■□□□ 1.4
CPS1P31327 SLC7A15P-201ENST00000424028 1363 ntBASIC23.81■■□□□ 1.4
CPS1P31327 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CPS1P31327 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CPS1P31327 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC23.81■■□□□ 1.4
CPS1P31327 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CPS1P31327 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CPS1P31327 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
CPS1P31327 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC23.81■■□□□ 1.4
CPS1P31327 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
CPS1P31327 ANKRD19P-201ENST00000338192 862 ntBASIC23.8■■□□□ 1.4
CPS1P31327 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC23.8■■□□□ 1.4
CPS1P31327 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC23.8■■□□□ 1.4
CPS1P31327 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC23.8■■□□□ 1.4
CPS1P31327 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC23.8■■□□□ 1.4
CPS1P31327 NARF-206ENST00000457415 1668 ntTSL 5 BASIC23.8■■□□□ 1.4
CPS1P31327 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
CPS1P31327 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CPS1P31327 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC23.8■■□□□ 1.4
CPS1P31327 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC23.8■■□□□ 1.4
CPS1P31327 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CPS1P31327 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC23.8■■□□□ 1.4
CPS1P31327 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
CPS1P31327 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
CPS1P31327 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC23.8■■□□□ 1.4
CPS1P31327 AL080243.2-201ENST00000418783 582 ntBASIC23.79■■□□□ 1.4
CPS1P31327 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CPS1P31327 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC23.79■■□□□ 1.4
CPS1P31327 AC055876.2-201ENST00000531834 546 ntBASIC23.79■■□□□ 1.4
CPS1P31327 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CPS1P31327 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
CPS1P31327 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CPS1P31327 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CPS1P31327 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC23.79■■□□□ 1.4
CPS1P31327 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC23.79■■□□□ 1.4
CPS1P31327 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC23.79■■□□□ 1.4
CPS1P31327 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CPS1P31327 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC23.79■■□□□ 1.4
CPS1P31327 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC23.79■■□□□ 1.4
CPS1P31327 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CPS1P31327 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CPS1P31327 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CPS1P31327 CENPM-206ENST00000407253 818 ntTSL 2 BASIC23.79■■□□□ 1.4
CPS1P31327 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CPS1P31327 MFF-223ENST00000524634 647 ntTSL 2 BASIC23.79■■□□□ 1.4
CPS1P31327 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC23.79■■□□□ 1.4
CPS1P31327 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC23.79■■□□□ 1.4
CPS1P31327 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC23.79■■□□□ 1.4
CPS1P31327 AC091167.2-201ENST00000579581 588 ntBASIC23.79■■□□□ 1.4
CPS1P31327 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC23.79■■□□□ 1.4
CPS1P31327 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CPS1P31327 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC23.78■■□□□ 1.4
CPS1P31327 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CPS1P31327 PODN-203ENST00000395871 2744 ntTSL 5 BASIC23.78■■□□□ 1.4
CPS1P31327 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC23.78■■□□□ 1.4
CPS1P31327 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
CPS1P31327 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC23.78■■□□□ 1.4
CPS1P31327 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC23.78■■□□□ 1.4
CPS1P31327 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CPS1P31327 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CPS1P31327 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CPS1P31327 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC23.78■■□□□ 1.4
CPS1P31327 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CPS1P31327 ELK2AP-201ENST00000392510 1007 ntBASIC23.78■■□□□ 1.4
CPS1P31327 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC23.78■■□□□ 1.4
CPS1P31327 EGFEM1P-202ENST00000431685 1563 ntBASIC23.78■■□□□ 1.4
CPS1P31327 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CPS1P31327 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CPS1P31327 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CPS1P31327 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CPS1P31327 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms