Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
PTPN6P29350 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
PTPN6P29350 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN6P29350 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN6P29350 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
PTPN6P29350 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.25■□□□□ 0.19
PTPN6P29350 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PTPN6P29350 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.25■□□□□ 0.19
PTPN6P29350 UNC93B7-201ENST00000509439 705 ntBASIC16.25■□□□□ 0.19
PTPN6P29350 AC096582.2-201ENST00000510860 516 ntBASIC16.25■□□□□ 0.19
PTPN6P29350 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.25■□□□□ 0.19
PTPN6P29350 AC009533.2-201ENST00000543664 586 ntBASIC16.25■□□□□ 0.19
PTPN6P29350 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.25■□□□□ 0.19
PTPN6P29350 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
PTPN6P29350 IFNL4P1-201ENST00000607083 540 ntBASIC16.25■□□□□ 0.19
PTPN6P29350 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PTPN6P29350 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN6P29350 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.25■□□□□ 0.19
PTPN6P29350 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
PTPN6P29350 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PTPN6P29350 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN6P29350 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PTPN6P29350 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN6P29350 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
PTPN6P29350 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN6P29350 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN6P29350 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.25■□□□□ 0.19
PTPN6P29350 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN6P29350 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN6P29350 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PTPN6P29350 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN6P29350 PCDHB17P-201ENST00000539533 2393 ntBASIC16.24■□□□□ 0.19
PTPN6P29350 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.24■□□□□ 0.19
PTPN6P29350 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN6P29350 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN6P29350 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN6P29350 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PTPN6P29350 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.24■□□□□ 0.19
PTPN6P29350 GPR89P-201ENST00000407924 1495 ntBASIC16.24■□□□□ 0.19
PTPN6P29350 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.24■□□□□ 0.19
PTPN6P29350 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN6P29350 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN6P29350 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN6P29350 AC006449.5-201ENST00000610658 2098 ntBASIC16.24■□□□□ 0.19
PTPN6P29350 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN6P29350 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.24■□□□□ 0.19
PTPN6P29350 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.24■□□□□ 0.19
PTPN6P29350 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN6P29350 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN6P29350 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.24■□□□□ 0.19
PTPN6P29350 KRT16P4-201ENST00000453883 522 ntBASIC16.24■□□□□ 0.19
PTPN6P29350 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN6P29350 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN6P29350 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.24■□□□□ 0.19
PTPN6P29350 STK19B-204ENST00000512515 211 ntBASIC16.24■□□□□ 0.19
PTPN6P29350 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.24■□□□□ 0.19
PTPN6P29350 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.24■□□□□ 0.19
PTPN6P29350 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.24■□□□□ 0.19
PTPN6P29350 AC114341.1-201ENST00000618070 349 ntBASIC16.24■□□□□ 0.19
PTPN6P29350 AL691432.3-201ENST00000621860 400 ntBASIC16.24■□□□□ 0.19
PTPN6P29350 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN6P29350 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN6P29350 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
PTPN6P29350 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.24■□□□□ 0.19
PTPN6P29350 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN6P29350 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.24■□□□□ 0.19
PTPN6P29350 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN6P29350 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
PTPN6P29350 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.24■□□□□ 0.19
PTPN6P29350 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN6P29350 TP73-AS1-210ENST00000637775 1455 ntBASIC16.23■□□□□ 0.19
PTPN6P29350 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN6P29350 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.23■□□□□ 0.19
PTPN6P29350 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN6P29350 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.23■□□□□ 0.19
PTPN6P29350 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN6P29350 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN6P29350 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN6P29350 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN6P29350 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN6P29350 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN6P29350 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN6P29350 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN6P29350 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN6P29350 AC003669.1-201ENST00000334569 611 ntBASIC16.23■□□□□ 0.19
PTPN6P29350 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.23■□□□□ 0.19
PTPN6P29350 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN6P29350 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.23■□□□□ 0.19
PTPN6P29350 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.23■□□□□ 0.19
PTPN6P29350 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.23■□□□□ 0.19
PTPN6P29350 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.23■□□□□ 0.19
PTPN6P29350 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.23■□□□□ 0.19
PTPN6P29350 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN6P29350 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.23■□□□□ 0.19
PTPN6P29350 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PTPN6P29350 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PTPN6P29350 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN6P29350 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN6P29350 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN6P29350 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms