Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC22.06■■□□□ 1.12
RXRBP28702 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC22.06■■□□□ 1.12
RXRBP28702 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC22.06■■□□□ 1.12
RXRBP28702 AP001350.2-201ENST00000625104 1094 ntBASIC22.06■■□□□ 1.12
RXRBP28702 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RXRBP28702 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RXRBP28702 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC22.06■■□□□ 1.12
RXRBP28702 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.06■■□□□ 1.12
RXRBP28702 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC22.06■■□□□ 1.12
RXRBP28702 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RXRBP28702 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RXRBP28702 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RXRBP28702 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC22.06■■□□□ 1.12
RXRBP28702 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
RXRBP28702 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RXRBP28702 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
RXRBP28702 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RXRBP28702 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RXRBP28702 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC22.05■■□□□ 1.12
RXRBP28702 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
RXRBP28702 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
RXRBP28702 RBM39-205ENST00000397370 612 ntTSL 2 BASIC22.05■■□□□ 1.12
RXRBP28702 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC22.05■■□□□ 1.12
RXRBP28702 AP001258.2-201ENST00000529891 490 ntBASIC22.05■■□□□ 1.12
RXRBP28702 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC22.05■■□□□ 1.12
RXRBP28702 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RXRBP28702 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RXRBP28702 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
RXRBP28702 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
RXRBP28702 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RXRBP28702 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.05■■□□□ 1.12
RXRBP28702 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC22.05■■□□□ 1.12
RXRBP28702 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RXRBP28702 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
RXRBP28702 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
RXRBP28702 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC22.04■■□□□ 1.12
RXRBP28702 CLK3P2-201ENST00000427566 1453 ntBASIC22.04■■□□□ 1.12
RXRBP28702 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC22.04■■□□□ 1.12
RXRBP28702 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
RXRBP28702 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC22.04■■□□□ 1.12
RXRBP28702 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC22.04■■□□□ 1.12
RXRBP28702 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RXRBP28702 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
RXRBP28702 RPL13AP20-201ENST00000459725 609 ntBASIC22.04■■□□□ 1.12
RXRBP28702 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC22.04■■□□□ 1.12
RXRBP28702 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RXRBP28702 AC091167.2-201ENST00000579581 588 ntBASIC22.04■■□□□ 1.12
RXRBP28702 AC021097.1-201ENST00000607902 574 ntBASIC22.04■■□□□ 1.12
RXRBP28702 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC22.04■■□□□ 1.12
RXRBP28702 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC22.04■■□□□ 1.12
RXRBP28702 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RXRBP28702 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
RXRBP28702 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RXRBP28702 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
RXRBP28702 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC22.04■■□□□ 1.12
RXRBP28702 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RXRBP28702 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RXRBP28702 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
RXRBP28702 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RXRBP28702 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
RXRBP28702 GZMB-202ENST00000382540 816 ntTSL 5 BASIC22.03■■□□□ 1.12
RXRBP28702 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC22.03■■□□□ 1.12
RXRBP28702 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC22.03■■□□□ 1.12
RXRBP28702 AC104596.2-201ENST00000512793 793 ntBASIC22.03■■□□□ 1.12
RXRBP28702 HNRNPUP1-201ENST00000554987 333 ntBASIC22.03■■□□□ 1.12
RXRBP28702 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC22.03■■□□□ 1.12
RXRBP28702 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC22.03■■□□□ 1.12
RXRBP28702 AL033527.5-202ENST00000641632 1098 ntBASIC22.03■■□□□ 1.12
RXRBP28702 AL096828.2-201ENST00000567259 1965 ntBASIC22.03■■□□□ 1.12
RXRBP28702 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RXRBP28702 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC22.03■■□□□ 1.12
RXRBP28702 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RXRBP28702 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC22.03■■□□□ 1.12
RXRBP28702 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RXRBP28702 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RXRBP28702 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RXRBP28702 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC22.02■■□□□ 1.12
RXRBP28702 AL020996.1-203ENST00000536896 2307 ntBASIC22.02■■□□□ 1.12
RXRBP28702 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
RXRBP28702 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RXRBP28702 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RXRBP28702 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RXRBP28702 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RXRBP28702 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RXRBP28702 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RXRBP28702 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC22.02■■□□□ 1.12
RXRBP28702 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC22.02■■□□□ 1.12
RXRBP28702 YBX1P6-201ENST00000442962 1002 ntBASIC22.02■■□□□ 1.12
RXRBP28702 NME4-207ENST00000450036 985 ntTSL 3 BASIC22.02■■□□□ 1.12
RXRBP28702 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RXRBP28702 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC22.02■■□□□ 1.12
RXRBP28702 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC22.02■■□□□ 1.12
RXRBP28702 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC22.02■■□□□ 1.12
RXRBP28702 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC22.02■■□□□ 1.12
RXRBP28702 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC22.02■■□□□ 1.12
RXRBP28702 RIT1-205ENST00000539040 919 ntTSL 2 BASIC22.02■■□□□ 1.12
RXRBP28702 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC22.02■■□□□ 1.12
RXRBP28702 AC105129.2-201ENST00000559536 390 ntBASIC22.02■■□□□ 1.12
RXRBP28702 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC22.02■■□□□ 1.12
RXRBP28702 MIR5572-201ENST00000583188 137 ntBASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms