Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MMP8P22894 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MMP8P22894 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
MMP8P22894 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MMP8P22894 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MMP8P22894 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
MMP8P22894 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MMP8P22894 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MMP8P22894 KRT8P49-201ENST00000604166 1432 ntBASIC17.97■□□□□ 0.47
MMP8P22894 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.97■□□□□ 0.47
MMP8P22894 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.97■□□□□ 0.47
MMP8P22894 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.96■□□□□ 0.47
MMP8P22894 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MMP8P22894 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MMP8P22894 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
MMP8P22894 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MMP8P22894 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.96■□□□□ 0.47
MMP8P22894 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
MMP8P22894 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MMP8P22894 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MMP8P22894 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.96■□□□□ 0.47
MMP8P22894 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MMP8P22894 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
MMP8P22894 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MMP8P22894 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MMP8P22894 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.96■□□□□ 0.47
MMP8P22894 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MMP8P22894 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MMP8P22894 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
MMP8P22894 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
MMP8P22894 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.96■□□□□ 0.47
MMP8P22894 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.96■□□□□ 0.47
MMP8P22894 AC073621.1-201ENST00000392730 636 ntBASIC17.96■□□□□ 0.47
MMP8P22894 AL450487.1-201ENST00000426799 995 ntBASIC17.96■□□□□ 0.47
MMP8P22894 HNRNPDP1-201ENST00000439535 754 ntBASIC17.96■□□□□ 0.47
MMP8P22894 FAM197Y8-203ENST00000450145 560 ntBASIC17.96■□□□□ 0.47
MMP8P22894 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.96■□□□□ 0.47
MMP8P22894 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
MMP8P22894 AP002490.2-201ENST00000524791 560 ntBASIC17.96■□□□□ 0.47
MMP8P22894 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.96■□□□□ 0.47
MMP8P22894 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.96■□□□□ 0.47
MMP8P22894 OR7E14P-202ENST00000530490 1290 ntBASIC17.96■□□□□ 0.47
MMP8P22894 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.96■□□□□ 0.47
MMP8P22894 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MMP8P22894 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.96■□□□□ 0.47
MMP8P22894 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.96■□□□□ 0.47
MMP8P22894 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
MMP8P22894 AF228730.7-201ENST00000641842 219 ntBASIC17.96■□□□□ 0.47
MMP8P22894 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MMP8P22894 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
MMP8P22894 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
MMP8P22894 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MMP8P22894 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MMP8P22894 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MMP8P22894 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MMP8P22894 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
MMP8P22894 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MMP8P22894 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.96■□□□□ 0.47
MMP8P22894 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MMP8P22894 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.96■□□□□ 0.46
MMP8P22894 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
MMP8P22894 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MMP8P22894 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MMP8P22894 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
MMP8P22894 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MMP8P22894 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MMP8P22894 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.95■□□□□ 0.46
MMP8P22894 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
MMP8P22894 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.95■□□□□ 0.46
MMP8P22894 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MMP8P22894 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
MMP8P22894 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MMP8P22894 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
MMP8P22894 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.95■□□□□ 0.46
MMP8P22894 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MMP8P22894 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MMP8P22894 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.95■□□□□ 0.46
MMP8P22894 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.95■□□□□ 0.46
MMP8P22894 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MMP8P22894 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.95■□□□□ 0.46
MMP8P22894 AC079781.3-201ENST00000449110 356 ntBASIC17.95■□□□□ 0.46
MMP8P22894 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.95■□□□□ 0.46
MMP8P22894 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.95■□□□□ 0.46
MMP8P22894 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MMP8P22894 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.95■□□□□ 0.46
MMP8P22894 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MMP8P22894 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
MMP8P22894 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MMP8P22894 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MMP8P22894 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.95■□□□□ 0.46
MMP8P22894 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
MMP8P22894 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
MMP8P22894 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MMP8P22894 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MMP8P22894 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MMP8P22894 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
MMP8P22894 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MMP8P22894 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.94■□□□□ 0.46
MMP8P22894 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MMP8P22894 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms