Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFX1P22670 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFX1P22670 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.64■□□□□ 0.57
RFX1P22670 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RFX1P22670 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFX1P22670 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.64■□□□□ 0.57
RFX1P22670 HNRNPDP1-201ENST00000439535 754 ntBASIC18.64■□□□□ 0.57
RFX1P22670 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.64■□□□□ 0.57
RFX1P22670 KRT18P3-201ENST00000451602 1288 ntBASIC18.64■□□□□ 0.57
RFX1P22670 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.64■□□□□ 0.57
RFX1P22670 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RFX1P22670 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.64■□□□□ 0.57
RFX1P22670 AP001160.2-201ENST00000596071 487 ntBASIC18.64■□□□□ 0.57
RFX1P22670 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFX1P22670 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFX1P22670 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFX1P22670 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
RFX1P22670 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFX1P22670 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RFX1P22670 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RFX1P22670 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
RFX1P22670 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.63■□□□□ 0.57
RFX1P22670 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX1P22670 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX1P22670 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX1P22670 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX1P22670 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RFX1P22670 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.63■□□□□ 0.57
RFX1P22670 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX1P22670 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
RFX1P22670 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RFX1P22670 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX1P22670 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX1P22670 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.63■□□□□ 0.57
RFX1P22670 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX1P22670 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFX1P22670 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RFX1P22670 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFX1P22670 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.63■□□□□ 0.57
RFX1P22670 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.63■□□□□ 0.57
RFX1P22670 AC004967.1-201ENST00000453589 447 ntBASIC18.63■□□□□ 0.57
RFX1P22670 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.63■□□□□ 0.57
RFX1P22670 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.63■□□□□ 0.57
RFX1P22670 AC145285.3-201ENST00000564603 959 ntBASIC18.63■□□□□ 0.57
RFX1P22670 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.63■□□□□ 0.57
RFX1P22670 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
RFX1P22670 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFX1P22670 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.63■□□□□ 0.57
RFX1P22670 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.63■□□□□ 0.57
RFX1P22670 AP000867.4-201ENST00000641616 219 ntBASIC18.63■□□□□ 0.57
RFX1P22670 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFX1P22670 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.63■□□□□ 0.57
RFX1P22670 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RFX1P22670 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX1P22670 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFX1P22670 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX1P22670 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFX1P22670 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFX1P22670 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX1P22670 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX1P22670 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX1P22670 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.63■□□□□ 0.57
RFX1P22670 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RFX1P22670 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX1P22670 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFX1P22670 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX1P22670 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RFX1P22670 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
RFX1P22670 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX1P22670 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX1P22670 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RFX1P22670 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.62■□□□□ 0.57
RFX1P22670 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RFX1P22670 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
RFX1P22670 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RFX1P22670 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX1P22670 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX1P22670 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX1P22670 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFX1P22670 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.62■□□□□ 0.57
RFX1P22670 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.62■□□□□ 0.57
RFX1P22670 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX1P22670 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RFX1P22670 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX1P22670 AL020989.1-201ENST00000422979 469 ntBASIC18.62■□□□□ 0.57
RFX1P22670 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.62■□□□□ 0.57
RFX1P22670 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RFX1P22670 GPX1P2-201ENST00000429271 606 ntBASIC18.62■□□□□ 0.57
RFX1P22670 RPS2P1-201ENST00000434010 821 ntBASIC18.62■□□□□ 0.57
RFX1P22670 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.62■□□□□ 0.57
RFX1P22670 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RFX1P22670 RNA5SP416-201ENST00000516838 111 ntBASIC18.62■□□□□ 0.57
RFX1P22670 OR7E14P-202ENST00000530490 1290 ntBASIC18.62■□□□□ 0.57
RFX1P22670 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX1P22670 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.62■□□□□ 0.57
RFX1P22670 AC040169.1-201ENST00000565382 521 ntBASIC18.62■□□□□ 0.57
RFX1P22670 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.62■□□□□ 0.57
RFX1P22670 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.62■□□□□ 0.57
RFX1P22670 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RFX1P22670 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms