Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN3P20807 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.51■□□□□ 0.23
CAPN3P20807 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.51■□□□□ 0.23
CAPN3P20807 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN3P20807 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN3P20807 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CAPN3P20807 AL022342.1-201ENST00000400363 863 ntBASIC16.51■□□□□ 0.23
CAPN3P20807 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CAPN3P20807 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.51■□□□□ 0.23
CAPN3P20807 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.51■□□□□ 0.23
CAPN3P20807 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.51■□□□□ 0.23
CAPN3P20807 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN3P20807 LINC01711-201ENST00000598340 967 ntBASIC16.51■□□□□ 0.23
CAPN3P20807 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.51■□□□□ 0.23
CAPN3P20807 AL121672.3-201ENST00000608644 468 ntBASIC16.51■□□□□ 0.23
CAPN3P20807 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN3P20807 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.51■□□□□ 0.23
CAPN3P20807 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN3P20807 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.51■□□□□ 0.23
CAPN3P20807 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CAPN3P20807 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN3P20807 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN3P20807 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN3P20807 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN3P20807 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN3P20807 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
CAPN3P20807 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CAPN3P20807 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN3P20807 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN3P20807 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CAPN3P20807 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.51■□□□□ 0.23
CAPN3P20807 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.5■□□□□ 0.23
CAPN3P20807 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN3P20807 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
CAPN3P20807 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CAPN3P20807 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CAPN3P20807 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.5■□□□□ 0.23
CAPN3P20807 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN3P20807 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.5■□□□□ 0.23
CAPN3P20807 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.5■□□□□ 0.23
CAPN3P20807 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN3P20807 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN3P20807 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.5■□□□□ 0.23
CAPN3P20807 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CAPN3P20807 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN3P20807 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN3P20807 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.5■□□□□ 0.23
CAPN3P20807 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.5■□□□□ 0.23
CAPN3P20807 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN3P20807 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN3P20807 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN3P20807 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN3P20807 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN3P20807 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.5■□□□□ 0.23
CAPN3P20807 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.5■□□□□ 0.23
CAPN3P20807 TSSC2-201ENST00000450217 709 ntBASIC16.5■□□□□ 0.23
CAPN3P20807 BX276092.5-203ENST00000456199 560 ntBASIC16.5■□□□□ 0.23
CAPN3P20807 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.5■□□□□ 0.23
CAPN3P20807 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.5■□□□□ 0.23
CAPN3P20807 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.5■□□□□ 0.23
CAPN3P20807 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN3P20807 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.5■□□□□ 0.23
CAPN3P20807 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.5■□□□□ 0.23
CAPN3P20807 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.5■□□□□ 0.23
CAPN3P20807 AL049757.1-201ENST00000616842 1596 ntBASIC16.5■□□□□ 0.23
CAPN3P20807 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CAPN3P20807 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN3P20807 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CAPN3P20807 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CAPN3P20807 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN3P20807 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN3P20807 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN3P20807 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN3P20807 Z83836.1-201ENST00000624605 1642 ntBASIC16.49■□□□□ 0.23
CAPN3P20807 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN3P20807 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN3P20807 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN3P20807 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.49■□□□□ 0.23
CAPN3P20807 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.49■□□□□ 0.23
CAPN3P20807 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN3P20807 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN3P20807 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN3P20807 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN3P20807 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CAPN3P20807 AL645929.1-201ENST00000420084 975 ntBASIC16.49■□□□□ 0.23
CAPN3P20807 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN3P20807 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN3P20807 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CAPN3P20807 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.49■□□□□ 0.23
CAPN3P20807 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.49■□□□□ 0.23
CAPN3P20807 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.49■□□□□ 0.23
CAPN3P20807 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.49■□□□□ 0.23
CAPN3P20807 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.49■□□□□ 0.23
CAPN3P20807 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CAPN3P20807 AC117500.6-201ENST00000624871 588 ntBASIC16.49■□□□□ 0.23
CAPN3P20807 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.49■□□□□ 0.23
CAPN3P20807 PCDHA1-201ENST00000378133 2726 ntBASIC16.49■□□□□ 0.23
CAPN3P20807 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CAPN3P20807 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.49■□□□□ 0.23
CAPN3P20807 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms