Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT4P19013 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT4P19013 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT4P19013 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
KRT4P19013 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT4P19013 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
KRT4P19013 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT4P19013 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
KRT4P19013 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT4P19013 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.21■□□□□ 0.35
KRT4P19013 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.21■□□□□ 0.35
KRT4P19013 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT4P19013 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT4P19013 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.21■□□□□ 0.35
KRT4P19013 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.21■□□□□ 0.35
KRT4P19013 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.21■□□□□ 0.35
KRT4P19013 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.21■□□□□ 0.35
KRT4P19013 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.21■□□□□ 0.35
KRT4P19013 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.21■□□□□ 0.35
KRT4P19013 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
KRT4P19013 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT4P19013 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT4P19013 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT4P19013 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT4P19013 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT4P19013 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT4P19013 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT4P19013 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT4P19013 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
KRT4P19013 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
KRT4P19013 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT4P19013 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT4P19013 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT4P19013 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
KRT4P19013 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
KRT4P19013 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
KRT4P19013 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
KRT4P19013 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
KRT4P19013 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT4P19013 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
KRT4P19013 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.2■□□□□ 0.34
KRT4P19013 AC022188.1-201ENST00000620960 1664 ntBASIC17.2■□□□□ 0.34
KRT4P19013 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
KRT4P19013 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
KRT4P19013 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT4P19013 AL645728.1-201ENST00000366221 2101 ntBASIC17.2■□□□□ 0.34
KRT4P19013 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KRT4P19013 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.2■□□□□ 0.34
KRT4P19013 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT4P19013 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KRT4P19013 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
KRT4P19013 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KRT4P19013 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT4P19013 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.2■□□□□ 0.34
KRT4P19013 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KRT4P19013 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT4P19013 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT4P19013 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT4P19013 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.2■□□□□ 0.34
KRT4P19013 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT4P19013 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KRT4P19013 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.2■□□□□ 0.34
KRT4P19013 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
KRT4P19013 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
KRT4P19013 AL390719.2-201ENST00000606993 987 ntBASIC17.2■□□□□ 0.34
KRT4P19013 AC011558.1-201ENST00000623459 338 ntBASIC17.2■□□□□ 0.34
KRT4P19013 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.2■□□□□ 0.34
KRT4P19013 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT4P19013 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT4P19013 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KRT4P19013 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KRT4P19013 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KRT4P19013 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.2■□□□□ 0.34
KRT4P19013 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.2■□□□□ 0.34
KRT4P19013 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.2■□□□□ 0.34
KRT4P19013 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT4P19013 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KRT4P19013 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT4P19013 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT4P19013 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
KRT4P19013 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KRT4P19013 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
KRT4P19013 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT4P19013 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT4P19013 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.2■□□□□ 0.34
KRT4P19013 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
KRT4P19013 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT4P19013 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.19■□□□□ 0.34
KRT4P19013 PAUPAR-201ENST00000630360 2965 ntBASIC17.19■□□□□ 0.34
KRT4P19013 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT4P19013 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT4P19013 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.19■□□□□ 0.34
KRT4P19013 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
KRT4P19013 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT4P19013 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT4P19013 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.19■□□□□ 0.34
KRT4P19013 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT4P19013 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.19■□□□□ 0.34
KRT4P19013 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.19■□□□□ 0.34
KRT4P19013 AL359075.1-203ENST00000462729 1002 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms