Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.26■□□□□ 0.35
VCLP18206 AL356309.3-201ENST00000624132 1934 ntBASIC17.26■□□□□ 0.35
VCLP18206 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCLP18206 AC003669.1-201ENST00000334569 611 ntBASIC17.26■□□□□ 0.35
VCLP18206 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.26■□□□□ 0.35
VCLP18206 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCLP18206 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VCLP18206 AC026396.1-201ENST00000419388 421 ntBASIC17.26■□□□□ 0.35
VCLP18206 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCLP18206 AF186996.4-201ENST00000467186 377 ntBASIC17.26■□□□□ 0.35
VCLP18206 AC073648.2-201ENST00000510116 352 ntBASIC17.26■□□□□ 0.35
VCLP18206 AL662844.1-201ENST00000546340 181 ntBASIC17.26■□□□□ 0.35
VCLP18206 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.26■□□□□ 0.35
VCLP18206 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.26■□□□□ 0.35
VCLP18206 AC073592.5-201ENST00000624854 528 ntBASIC17.26■□□□□ 0.35
VCLP18206 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
VCLP18206 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
VCLP18206 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCLP18206 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VCLP18206 PMPCAP1-201ENST00000508114 1576 ntBASIC17.26■□□□□ 0.35
VCLP18206 AL596257.1-201ENST00000641463 2694 ntBASIC17.26■□□□□ 0.35
VCLP18206 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCLP18206 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCLP18206 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCLP18206 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
VCLP18206 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.26■□□□□ 0.35
VCLP18206 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCLP18206 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
VCLP18206 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.26■□□□□ 0.35
VCLP18206 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCLP18206 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCLP18206 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.26■□□□□ 0.35
VCLP18206 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.26■□□□□ 0.35
VCLP18206 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCLP18206 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
VCLP18206 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VCLP18206 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VCLP18206 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.25■□□□□ 0.35
VCLP18206 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.25■□□□□ 0.35
VCLP18206 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VCLP18206 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VCLP18206 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VCLP18206 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
VCLP18206 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VCLP18206 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.25■□□□□ 0.35
VCLP18206 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.25■□□□□ 0.35
VCLP18206 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.25■□□□□ 0.35
VCLP18206 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
VCLP18206 AL049757.1-201ENST00000616842 1596 ntBASIC17.25■□□□□ 0.35
VCLP18206 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.25■□□□□ 0.35
VCLP18206 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
VCLP18206 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VCLP18206 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VCLP18206 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VCLP18206 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.25■□□□□ 0.35
VCLP18206 AC079781.3-201ENST00000449110 356 ntBASIC17.25■□□□□ 0.35
VCLP18206 FGFR3P6-201ENST00000457012 610 ntBASIC17.25■□□□□ 0.35
VCLP18206 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
VCLP18206 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.25■□□□□ 0.35
VCLP18206 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.25■□□□□ 0.35
VCLP18206 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.25■□□□□ 0.35
VCLP18206 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.25■□□□□ 0.35
VCLP18206 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
VCLP18206 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VCLP18206 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.25■□□□□ 0.35
VCLP18206 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.25■□□□□ 0.35
VCLP18206 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
VCLP18206 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VCLP18206 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
VCLP18206 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
VCLP18206 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
VCLP18206 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VCLP18206 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VCLP18206 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.24■□□□□ 0.35
VCLP18206 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCLP18206 CROCCP2-202ENST00000412962 2773 ntBASIC17.24■□□□□ 0.35
VCLP18206 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
VCLP18206 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.24■□□□□ 0.35
VCLP18206 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCLP18206 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCLP18206 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
VCLP18206 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.24■□□□□ 0.35
VCLP18206 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
VCLP18206 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCLP18206 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCLP18206 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VCLP18206 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCLP18206 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VCLP18206 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.24■□□□□ 0.35
VCLP18206 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.24■□□□□ 0.35
VCLP18206 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCLP18206 KLF4P1-201ENST00000412782 1185 ntBASIC17.24■□□□□ 0.35
VCLP18206 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.24■□□□□ 0.35
VCLP18206 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.24■□□□□ 0.35
VCLP18206 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.24■□□□□ 0.35
VCLP18206 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
VCLP18206 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.24■□□□□ 0.35
VCLP18206 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VCLP18206 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
VCLP18206 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms