Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC2P18074 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC2P18074 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC2P18074 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC2P18074 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.6■□□□□ 0.41
ERCC2P18074 AL773604.1-201ENST00000617417 272 ntBASIC17.6■□□□□ 0.41
ERCC2P18074 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
ERCC2P18074 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC2P18074 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.6■□□□□ 0.41
ERCC2P18074 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
ERCC2P18074 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.6■□□□□ 0.41
ERCC2P18074 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC2P18074 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC2P18074 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC2P18074 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC2P18074 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC2P18074 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
ERCC2P18074 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
ERCC2P18074 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC2P18074 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC2P18074 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC2P18074 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC2P18074 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.59■□□□□ 0.41
ERCC2P18074 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC2P18074 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC2P18074 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC2P18074 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
ERCC2P18074 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC2P18074 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC2P18074 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.59■□□□□ 0.41
ERCC2P18074 AP002414.3-201ENST00000589352 1468 ntBASIC17.59■□□□□ 0.41
ERCC2P18074 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC2P18074 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC2P18074 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC2P18074 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC2P18074 RPS2P28-201ENST00000314255 741 ntBASIC17.59■□□□□ 0.41
ERCC2P18074 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.59■□□□□ 0.41
ERCC2P18074 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.59■□□□□ 0.41
ERCC2P18074 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.59■□□□□ 0.41
ERCC2P18074 AL031284.1-201ENST00000419297 478 ntBASIC17.59■□□□□ 0.41
ERCC2P18074 PAWRP1-201ENST00000451083 565 ntBASIC17.59■□□□□ 0.41
ERCC2P18074 AC009078.2-202ENST00000463353 338 ntBASIC17.59■□□□□ 0.41
ERCC2P18074 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.59■□□□□ 0.41
ERCC2P18074 DUX4L17-201ENST00000557360 1267 ntBASIC17.59■□□□□ 0.41
ERCC2P18074 AC105339.3-201ENST00000560043 636 ntBASIC17.59■□□□□ 0.41
ERCC2P18074 AL121894.2-201ENST00000602977 491 ntBASIC17.59■□□□□ 0.41
ERCC2P18074 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.59■□□□□ 0.41
ERCC2P18074 AL805961.1-202ENST00000641562 540 ntBASIC17.59■□□□□ 0.41
ERCC2P18074 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ERCC2P18074 AC106886.4-201ENST00000623557 2502 ntBASIC17.59■□□□□ 0.41
ERCC2P18074 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
ERCC2P18074 AC009053.2-201ENST00000563701 2365 ntBASIC17.59■□□□□ 0.41
ERCC2P18074 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.59■□□□□ 0.41
ERCC2P18074 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
ERCC2P18074 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ERCC2P18074 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
ERCC2P18074 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
ERCC2P18074 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.58■□□□□ 0.41
ERCC2P18074 PI4KAP1-204ENST00000612579 1703 ntBASIC17.58■□□□□ 0.41
ERCC2P18074 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ERCC2P18074 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.58■□□□□ 0.41
ERCC2P18074 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ERCC2P18074 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.58■□□□□ 0.41
ERCC2P18074 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ERCC2P18074 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
ERCC2P18074 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ERCC2P18074 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ERCC2P18074 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
ERCC2P18074 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
ERCC2P18074 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC2P18074 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.58■□□□□ 0.4
ERCC2P18074 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC2P18074 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC2P18074 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC2P18074 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC2P18074 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.58■□□□□ 0.4
ERCC2P18074 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.58■□□□□ 0.4
ERCC2P18074 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC2P18074 RPS15P9-201ENST00000494093 319 ntBASIC17.58■□□□□ 0.4
ERCC2P18074 AC136632.2-201ENST00000512891 861 ntBASIC17.58■□□□□ 0.4
ERCC2P18074 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.58■□□□□ 0.4
ERCC2P18074 SLC25A6P4-201ENST00000586535 553 ntBASIC17.58■□□□□ 0.4
ERCC2P18074 AL049840.3-201ENST00000602669 611 ntBASIC17.58■□□□□ 0.4
ERCC2P18074 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC2P18074 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.58■□□□□ 0.4
ERCC2P18074 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.58■□□□□ 0.4
ERCC2P18074 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC2P18074 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.58■□□□□ 0.4
ERCC2P18074 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ERCC2P18074 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC2P18074 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.57■□□□□ 0.4
ERCC2P18074 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC2P18074 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.57■□□□□ 0.4
ERCC2P18074 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC2P18074 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC2P18074 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.57■□□□□ 0.4
ERCC2P18074 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC2P18074 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC2P18074 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ERCC2P18074 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms