Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
CCL3L1P16619 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCL3L1P16619 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL3L1P16619 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL3L1P16619 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
CCL3L1P16619 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.13□□□□□ -0.15
CCL3L1P16619 AC073621.1-201ENST00000392730 636 ntBASIC14.13□□□□□ -0.15
CCL3L1P16619 PTCHD3P3-201ENST00000403073 906 ntBASIC14.13□□□□□ -0.15
CCL3L1P16619 KRT18P27-201ENST00000427733 1299 ntBASIC14.13□□□□□ -0.15
CCL3L1P16619 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL3L1P16619 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCL3L1P16619 RNA5SP419-201ENST00000515908 135 ntBASIC14.13□□□□□ -0.15
CCL3L1P16619 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
CCL3L1P16619 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCL3L1P16619 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.13□□□□□ -0.15
CCL3L1P16619 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.13□□□□□ -0.15
CCL3L1P16619 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.13□□□□□ -0.15
CCL3L1P16619 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.13□□□□□ -0.15
CCL3L1P16619 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.13□□□□□ -0.15
CCL3L1P16619 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.13□□□□□ -0.15
CCL3L1P16619 MIR1199-201ENST00000621445 119 ntBASIC14.13□□□□□ -0.15
CCL3L1P16619 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.13□□□□□ -0.15
CCL3L1P16619 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.13□□□□□ -0.15
CCL3L1P16619 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.13□□□□□ -0.15
CCL3L1P16619 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCL3L1P16619 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL3L1P16619 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CCL3L1P16619 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.13□□□□□ -0.15
CCL3L1P16619 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CCL3L1P16619 HLA-A-201ENST00000376802 1334 ntBASIC14.13□□□□□ -0.15
CCL3L1P16619 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL3L1P16619 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL3L1P16619 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CCL3L1P16619 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CCL3L1P16619 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCL3L1P16619 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL3L1P16619 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL3L1P16619 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
CCL3L1P16619 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL3L1P16619 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCL3L1P16619 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.12□□□□□ -0.15
CCL3L1P16619 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.12□□□□□ -0.15
CCL3L1P16619 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.12□□□□□ -0.15
CCL3L1P16619 FDX1P1-201ENST00000449115 551 ntBASIC14.12□□□□□ -0.15
CCL3L1P16619 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.12□□□□□ -0.15
CCL3L1P16619 AC093909.1-201ENST00000504731 1122 ntBASIC14.12□□□□□ -0.15
CCL3L1P16619 AC136632.2-201ENST00000512891 861 ntBASIC14.12□□□□□ -0.15
CCL3L1P16619 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.12□□□□□ -0.15
CCL3L1P16619 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC14.12□□□□□ -0.15
CCL3L1P16619 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCL3L1P16619 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CCL3L1P16619 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.12□□□□□ -0.15
CCL3L1P16619 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.12□□□□□ -0.15
CCL3L1P16619 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.12□□□□□ -0.15
CCL3L1P16619 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.12□□□□□ -0.15
CCL3L1P16619 AL356488.2-201ENST00000602755 427 ntBASIC14.12□□□□□ -0.15
CCL3L1P16619 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCL3L1P16619 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.12□□□□□ -0.15
CCL3L1P16619 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
CCL3L1P16619 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.12□□□□□ -0.15
CCL3L1P16619 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCL3L1P16619 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL3L1P16619 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
CCL3L1P16619 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL3L1P16619 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCL3L1P16619 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL3L1P16619 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.12□□□□□ -0.15
CCL3L1P16619 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC14.12□□□□□ -0.15
CCL3L1P16619 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL3L1P16619 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL3L1P16619 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCL3L1P16619 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL3L1P16619 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCL3L1P16619 AC092068.3-201ENST00000587894 2016 ntBASIC14.12□□□□□ -0.15
CCL3L1P16619 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CCL3L1P16619 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL3L1P16619 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CCL3L1P16619 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL3L1P16619 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.11□□□□□ -0.15
CCL3L1P16619 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL3L1P16619 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL3L1P16619 AC243591.1-201ENST00000452967 1364 ntBASIC14.11□□□□□ -0.15
CCL3L1P16619 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.11□□□□□ -0.15
CCL3L1P16619 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.11□□□□□ -0.15
CCL3L1P16619 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL3L1P16619 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CCL3L1P16619 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.11□□□□□ -0.15
CCL3L1P16619 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL3L1P16619 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CCL3L1P16619 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL3L1P16619 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL3L1P16619 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL3L1P16619 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.11□□□□□ -0.15
CCL3L1P16619 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CCL3L1P16619 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CCL3L1P16619 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
CCL3L1P16619 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.11□□□□□ -0.15
CCL3L1P16619 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CCL3L1P16619 RPS15P9-201ENST00000494093 319 ntBASIC14.11□□□□□ -0.15
CCL3L1P16619 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms