Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 AC005104.2-201ENST00000427818 678 ntBASIC17.64■□□□□ 0.41
BRAFP15056 AC068472.1-201ENST00000474589 881 ntBASIC17.64■□□□□ 0.41
BRAFP15056 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BRAFP15056 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRAFP15056 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRAFP15056 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.64■□□□□ 0.41
BRAFP15056 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRAFP15056 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.64■□□□□ 0.41
BRAFP15056 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.64■□□□□ 0.41
BRAFP15056 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.64■□□□□ 0.41
BRAFP15056 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.64■□□□□ 0.41
BRAFP15056 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.64■□□□□ 0.41
BRAFP15056 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
BRAFP15056 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.64■□□□□ 0.41
BRAFP15056 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRAFP15056 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.64■□□□□ 0.41
BRAFP15056 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRAFP15056 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
BRAFP15056 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.64■□□□□ 0.41
BRAFP15056 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
BRAFP15056 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.64■□□□□ 0.41
BRAFP15056 AC026691.1-201ENST00000602502 2017 ntBASIC17.64■□□□□ 0.41
BRAFP15056 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRAFP15056 AC092171.3-201ENST00000610122 2651 ntBASIC17.64■□□□□ 0.41
BRAFP15056 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.64■□□□□ 0.41
BRAFP15056 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BRAFP15056 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.63■□□□□ 0.41
BRAFP15056 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.63■□□□□ 0.41
BRAFP15056 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BRAFP15056 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
BRAFP15056 BX276092.7-203ENST00000637198 1536 ntBASIC17.63■□□□□ 0.41
BRAFP15056 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.63■□□□□ 0.41
BRAFP15056 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRAFP15056 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.63■□□□□ 0.41
BRAFP15056 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRAFP15056 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
BRAFP15056 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BRAFP15056 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BRAFP15056 AC092053.1-201ENST00000605787 1936 ntBASIC17.63■□□□□ 0.41
BRAFP15056 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
BRAFP15056 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRAFP15056 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BRAFP15056 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRAFP15056 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BRAFP15056 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.63■□□□□ 0.41
BRAFP15056 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.63■□□□□ 0.41
BRAFP15056 KRT126P-201ENST00000549467 1181 ntBASIC17.63■□□□□ 0.41
BRAFP15056 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.63■□□□□ 0.41
BRAFP15056 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.63■□□□□ 0.41
BRAFP15056 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.63■□□□□ 0.41
BRAFP15056 AC012615.1-201ENST00000565797 1299 ntBASIC17.63■□□□□ 0.41
BRAFP15056 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.63■□□□□ 0.41
BRAFP15056 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.63■□□□□ 0.41
BRAFP15056 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRAFP15056 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.63■□□□□ 0.41
BRAFP15056 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.63■□□□□ 0.41
BRAFP15056 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.63■□□□□ 0.41
BRAFP15056 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.63■□□□□ 0.41
BRAFP15056 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BRAFP15056 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.63■□□□□ 0.41
BRAFP15056 AC009154.2-201ENST00000621177 724 ntBASIC17.63■□□□□ 0.41
BRAFP15056 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BRAFP15056 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRAFP15056 AC006449.5-201ENST00000610658 2098 ntBASIC17.63■□□□□ 0.41
BRAFP15056 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRAFP15056 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRAFP15056 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.63■□□□□ 0.41
BRAFP15056 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRAFP15056 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.63■□□□□ 0.41
BRAFP15056 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.63■□□□□ 0.41
BRAFP15056 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
BRAFP15056 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.63■□□□□ 0.41
BRAFP15056 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BRAFP15056 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
BRAFP15056 PCDHB17P-201ENST00000539533 2393 ntBASIC17.62■□□□□ 0.41
BRAFP15056 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BRAFP15056 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BRAFP15056 AC078925.2-201ENST00000624013 1973 ntBASIC17.62■□□□□ 0.41
BRAFP15056 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BRAFP15056 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BRAFP15056 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
BRAFP15056 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BRAFP15056 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.62■□□□□ 0.41
BRAFP15056 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.62■□□□□ 0.41
BRAFP15056 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BRAFP15056 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BRAFP15056 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BRAFP15056 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BRAFP15056 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BRAFP15056 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BRAFP15056 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BRAFP15056 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
BRAFP15056 IGHV3-47-201ENST00000425060 335 ntBASIC17.62■□□□□ 0.41
BRAFP15056 KRT18P65-201ENST00000439811 1286 ntBASIC17.62■□□□□ 0.41
BRAFP15056 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.62■□□□□ 0.41
BRAFP15056 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BRAFP15056 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
BRAFP15056 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
BRAFP15056 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.62■□□□□ 0.41
BRAFP15056 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms