Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC29.49■■■□□ 2.31
TOP2AP11388 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC29.49■■■□□ 2.31
TOP2AP11388 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
TOP2AP11388 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC29.49■■■□□ 2.31
TOP2AP11388 AL353705.2-201ENST00000428243 662 ntBASIC29.49■■■□□ 2.31
TOP2AP11388 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC29.49■■■□□ 2.31
TOP2AP11388 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC29.49■■■□□ 2.31
TOP2AP11388 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC29.49■■■□□ 2.31
TOP2AP11388 API5-211ENST00000534695 560 ntTSL 5 BASIC29.49■■■□□ 2.31
TOP2AP11388 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC29.49■■■□□ 2.31
TOP2AP11388 AC124947.2-201ENST00000547118 1133 ntBASIC29.49■■■□□ 2.31
TOP2AP11388 IGHV3-72-202ENST00000621503 303 ntBASIC29.49■■■□□ 2.31
TOP2AP11388 AC008764.6-201ENST00000595909 2069 ntBASIC29.49■■■□□ 2.31
TOP2AP11388 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
TOP2AP11388 AC087499.5-201ENST00000452760 1342 ntBASIC29.49■■■□□ 2.31
TOP2AP11388 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC29.48■■■□□ 2.31
TOP2AP11388 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC29.48■■■□□ 2.31
TOP2AP11388 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC29.48■■■□□ 2.31
TOP2AP11388 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC29.48■■■□□ 2.31
TOP2AP11388 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
TOP2AP11388 AC004233.3-201ENST00000607794 1269 ntBASIC29.48■■■□□ 2.31
TOP2AP11388 RNA5-8SN1-201ENST00000610460 153 ntBASIC29.48■■■□□ 2.31
TOP2AP11388 RNA5-8SN5-202ENST00000612463 153 ntBASIC29.48■■■□□ 2.31
TOP2AP11388 RNA5-8SN4-201ENST00000613359 153 ntBASIC29.48■■■□□ 2.31
TOP2AP11388 RNA5-8SN5-201ENST00000619471 153 ntBASIC29.48■■■□□ 2.31
TOP2AP11388 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
TOP2AP11388 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC29.48■■■□□ 2.31
TOP2AP11388 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC29.48■■■□□ 2.31
TOP2AP11388 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC29.48■■■□□ 2.31
TOP2AP11388 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC29.48■■■□□ 2.31
TOP2AP11388 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC29.48■■■□□ 2.31
TOP2AP11388 CETN4P-206ENST00000642099 2168 ntBASIC29.48■■■□□ 2.31
TOP2AP11388 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
TOP2AP11388 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
TOP2AP11388 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC29.47■■■□□ 2.31
TOP2AP11388 RPL37AP1-201ENST00000412502 279 ntBASIC29.47■■■□□ 2.31
TOP2AP11388 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
TOP2AP11388 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
TOP2AP11388 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
TOP2AP11388 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC29.47■■■□□ 2.31
TOP2AP11388 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
TOP2AP11388 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
TOP2AP11388 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
TOP2AP11388 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC29.47■■■□□ 2.31
TOP2AP11388 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
TOP2AP11388 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
TOP2AP11388 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC29.46■■■□□ 2.31
TOP2AP11388 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC29.46■■■□□ 2.31
TOP2AP11388 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC29.46■■■□□ 2.31
TOP2AP11388 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC29.46■■■□□ 2.31
TOP2AP11388 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC29.46■■■□□ 2.31
TOP2AP11388 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC29.46■■■□□ 2.31
TOP2AP11388 LITAF-210ENST00000571976 548 ntTSL 2 BASIC29.46■■■□□ 2.31
TOP2AP11388 LITAF-214ENST00000574703 486 ntTSL 2 BASIC29.46■■■□□ 2.31
TOP2AP11388 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC29.46■■■□□ 2.31
TOP2AP11388 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC29.46■■■□□ 2.31
TOP2AP11388 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC29.46■■■□□ 2.31
TOP2AP11388 CDK4-206ENST00000549606 558 ntTSL 2 BASIC29.45■■■□□ 2.31
TOP2AP11388 AC104794.3-201ENST00000566840 1248 ntBASIC29.45■■■□□ 2.31
TOP2AP11388 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC29.45■■■□□ 2.31
TOP2AP11388 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC29.45■■■□□ 2.31
TOP2AP11388 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
TOP2AP11388 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC29.45■■■□□ 2.31
TOP2AP11388 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
TOP2AP11388 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC29.45■■■□□ 2.31
TOP2AP11388 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC29.45■■■□□ 2.31
TOP2AP11388 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC29.45■■■□□ 2.3
TOP2AP11388 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC29.45■■■□□ 2.3
TOP2AP11388 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
TOP2AP11388 CENPM-206ENST00000407253 818 ntTSL 2 BASIC29.45■■■□□ 2.3
TOP2AP11388 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
TOP2AP11388 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC29.45■■■□□ 2.3
TOP2AP11388 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC29.45■■■□□ 2.3
TOP2AP11388 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC29.45■■■□□ 2.3
TOP2AP11388 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC29.45■■■□□ 2.3
TOP2AP11388 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC29.45■■■□□ 2.3
TOP2AP11388 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
TOP2AP11388 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
TOP2AP11388 COMP-202ENST00000425807 2292 ntTSL 2 BASIC29.44■■■□□ 2.3
TOP2AP11388 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC29.44■■■□□ 2.3
TOP2AP11388 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
TOP2AP11388 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC29.44■■■□□ 2.3
TOP2AP11388 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC29.44■■■□□ 2.3
TOP2AP11388 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC29.44■■■□□ 2.3
TOP2AP11388 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC29.44■■■□□ 2.3
TOP2AP11388 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC29.43■■■□□ 2.3
TOP2AP11388 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
TOP2AP11388 SNX33P1-201ENST00000592116 1762 ntBASIC29.43■■■□□ 2.3
TOP2AP11388 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC29.43■■■□□ 2.3
TOP2AP11388 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
TOP2AP11388 GOLGA2P9-201ENST00000596977 1937 ntBASIC29.43■■■□□ 2.3
TOP2AP11388 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
TOP2AP11388 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC29.43■■■□□ 2.3
TOP2AP11388 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
TOP2AP11388 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC29.43■■■□□ 2.3
TOP2AP11388 QPRT-203ENST00000562473 579 ntTSL 3 BASIC29.43■■■□□ 2.3
TOP2AP11388 AC013467.2-201ENST00000605472 835 ntBASIC29.43■■■□□ 2.3
TOP2AP11388 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC29.43■■■□□ 2.3
TOP2AP11388 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC29.43■■■□□ 2.3
TOP2AP11388 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms