Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AC009336.1-201ENST00000608941 1553 ntBASIC15.06■□□□□ 0
UBCP0CG48 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.06■□□□□ 0
UBCP0CG48 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBCP0CG48 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBCP0CG48 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
UBCP0CG48 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
UBCP0CG48 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.06■□□□□ 0
UBCP0CG48 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
UBCP0CG48 AC092068.3-201ENST00000587894 2016 ntBASIC15.05■□□□□ 0
UBCP0CG48 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC15.05■□□□□ 0
UBCP0CG48 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
UBCP0CG48 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
UBCP0CG48 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
UBCP0CG48 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
UBCP0CG48 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
UBCP0CG48 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.05■□□□□ 0
UBCP0CG48 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.05■□□□□ 0
UBCP0CG48 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.05■□□□□ 0
UBCP0CG48 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
UBCP0CG48 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.05■□□□□ -0
UBCP0CG48 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UBCP0CG48 AC003669.1-201ENST00000334569 611 ntBASIC15.05■□□□□ -0
UBCP0CG48 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.05■□□□□ -0
UBCP0CG48 DAP-202ENST00000432074 1048 ntTSL 2 BASIC15.05■□□□□ -0
UBCP0CG48 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.05■□□□□ -0
UBCP0CG48 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.05■□□□□ -0
UBCP0CG48 AC009533.2-201ENST00000543664 586 ntBASIC15.05■□□□□ -0
UBCP0CG48 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.05■□□□□ -0
UBCP0CG48 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC15.05■□□□□ -0
UBCP0CG48 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.05■□□□□ -0
UBCP0CG48 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.05■□□□□ -0
UBCP0CG48 AC011498.5-201ENST00000592027 486 ntBASIC15.05■□□□□ -0
UBCP0CG48 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.05■□□□□ -0
UBCP0CG48 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.05■□□□□ -0
UBCP0CG48 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.05■□□□□ -0
UBCP0CG48 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.05■□□□□ -0
UBCP0CG48 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.05■□□□□ -0
UBCP0CG48 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UBCP0CG48 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UBCP0CG48 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.05■□□□□ -0
UBCP0CG48 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
UBCP0CG48 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.05■□□□□ -0
UBCP0CG48 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UBCP0CG48 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.05■□□□□ -0
UBCP0CG48 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.05■□□□□ -0
UBCP0CG48 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UBCP0CG48 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.05■□□□□ -0
UBCP0CG48 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.05■□□□□ -0
UBCP0CG48 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.05■□□□□ -0
UBCP0CG48 AL603756.1-201ENST00000606511 2163 ntBASIC15.05■□□□□ -0
UBCP0CG48 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UBCP0CG48 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.05■□□□□ -0
UBCP0CG48 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.05■□□□□ -0
UBCP0CG48 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
UBCP0CG48 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
UBCP0CG48 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.05■□□□□ -0
UBCP0CG48 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
UBCP0CG48 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBCP0CG48 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.04■□□□□ -0
UBCP0CG48 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBCP0CG48 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
UBCP0CG48 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.04■□□□□ -0
UBCP0CG48 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.04■□□□□ -0
UBCP0CG48 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBCP0CG48 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.04■□□□□ -0
UBCP0CG48 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.04■□□□□ -0
UBCP0CG48 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.04■□□□□ -0
UBCP0CG48 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.04■□□□□ -0
UBCP0CG48 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
UBCP0CG48 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.04■□□□□ -0
UBCP0CG48 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.04■□□□□ -0
UBCP0CG48 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.04■□□□□ -0
UBCP0CG48 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
UBCP0CG48 AL135999.2-201ENST00000622438 1686 ntBASIC15.04■□□□□ -0
UBCP0CG48 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
UBCP0CG48 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.04■□□□□ -0
UBCP0CG48 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.04■□□□□ -0
UBCP0CG48 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBCP0CG48 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
UBCP0CG48 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBCP0CG48 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.04■□□□□ -0
UBCP0CG48 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.04■□□□□ -0
UBCP0CG48 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.04■□□□□ -0
UBCP0CG48 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.04■□□□□ -0
UBCP0CG48 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
UBCP0CG48 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.04■□□□□ -0
UBCP0CG48 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.04■□□□□ -0
UBCP0CG48 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
UBCP0CG48 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
UBCP0CG48 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.04■□□□□ -0
UBCP0CG48 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBCP0CG48 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBCP0CG48 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.04■□□□□ -0
UBCP0CG48 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
UBCP0CG48 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.04■□□□□ -0
UBCP0CG48 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
UBCP0CG48 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.04■□□□□ -0
UBCP0CG48 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.04■□□□□ -0
UBCP0CG48 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
UBCP0CG48 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms