Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FREM3P0C091 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
FREM3P0C091 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.51■□□□□ 0.07
FREM3P0C091 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.51■□□□□ 0.07
FREM3P0C091 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
FREM3P0C091 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
FREM3P0C091 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
FREM3P0C091 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.51■□□□□ 0.07
FREM3P0C091 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.51■□□□□ 0.07
FREM3P0C091 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
FREM3P0C091 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.51■□□□□ 0.07
FREM3P0C091 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.51■□□□□ 0.07
FREM3P0C091 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
FREM3P0C091 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FREM3P0C091 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
FREM3P0C091 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
FREM3P0C091 LINC00982-205ENST00000420957 435 ntBASIC15.51■□□□□ 0.07
FREM3P0C091 BX842568.4-201ENST00000421222 227 ntBASIC15.51■□□□□ 0.07
FREM3P0C091 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.51■□□□□ 0.07
FREM3P0C091 PAWRP1-201ENST00000451083 565 ntBASIC15.51■□□□□ 0.07
FREM3P0C091 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.51■□□□□ 0.07
FREM3P0C091 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
FREM3P0C091 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FREM3P0C091 AC004877.2-201ENST00000623941 599 ntBASIC15.51■□□□□ 0.07
FREM3P0C091 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FREM3P0C091 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
FREM3P0C091 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FREM3P0C091 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FREM3P0C091 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.51■□□□□ 0.07
FREM3P0C091 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FREM3P0C091 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.51■□□□□ 0.07
FREM3P0C091 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FREM3P0C091 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
FREM3P0C091 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FREM3P0C091 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC15.51■□□□□ 0.07
FREM3P0C091 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FREM3P0C091 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.5■□□□□ 0.07
FREM3P0C091 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.5■□□□□ 0.07
FREM3P0C091 ADH5P3-201ENST00000433842 1137 ntBASIC15.5■□□□□ 0.07
FREM3P0C091 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.5■□□□□ 0.07
FREM3P0C091 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FREM3P0C091 DNAJB3-202ENST00000449667 1266 ntBASIC15.5■□□□□ 0.07
FREM3P0C091 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.5■□□□□ 0.07
FREM3P0C091 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.5■□□□□ 0.07
FREM3P0C091 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC15.5■□□□□ 0.07
FREM3P0C091 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FREM3P0C091 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
FREM3P0C091 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FREM3P0C091 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FREM3P0C091 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
FREM3P0C091 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
FREM3P0C091 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
FREM3P0C091 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.5■□□□□ 0.07
FREM3P0C091 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.5■□□□□ 0.07
FREM3P0C091 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
FREM3P0C091 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
FREM3P0C091 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
FREM3P0C091 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
FREM3P0C091 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FREM3P0C091 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FREM3P0C091 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
FREM3P0C091 KRT18P13-201ENST00000400056 1290 ntBASIC15.5■□□□□ 0.07
FREM3P0C091 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.5■□□□□ 0.07
FREM3P0C091 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.5■□□□□ 0.07
FREM3P0C091 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.5■□□□□ 0.07
FREM3P0C091 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.5■□□□□ 0.07
FREM3P0C091 MIR4751-201ENST00000578027 74 ntBASIC15.5■□□□□ 0.07
FREM3P0C091 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.5■□□□□ 0.07
FREM3P0C091 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.5■□□□□ 0.07
FREM3P0C091 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FREM3P0C091 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
FREM3P0C091 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.5■□□□□ 0.07
FREM3P0C091 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FREM3P0C091 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
FREM3P0C091 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.5■□□□□ 0.07
FREM3P0C091 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.5■□□□□ 0.07
FREM3P0C091 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FREM3P0C091 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FREM3P0C091 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
FREM3P0C091 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.49■□□□□ 0.07
FREM3P0C091 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FREM3P0C091 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
FREM3P0C091 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FREM3P0C091 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FREM3P0C091 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.49■□□□□ 0.07
FREM3P0C091 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.49■□□□□ 0.07
FREM3P0C091 AC211486.1-202ENST00000416371 468 ntBASIC15.49■□□□□ 0.07
FREM3P0C091 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.49■□□□□ 0.07
FREM3P0C091 AC211476.1-201ENST00000503899 468 ntBASIC15.49■□□□□ 0.07
FREM3P0C091 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.49■□□□□ 0.07
FREM3P0C091 KRT19P2-202ENST00000557173 1012 ntBASIC15.49■□□□□ 0.07
FREM3P0C091 OR7E47P-204ENST00000575924 449 ntBASIC15.49■□□□□ 0.07
FREM3P0C091 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FREM3P0C091 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FREM3P0C091 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FREM3P0C091 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FREM3P0C091 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
FREM3P0C091 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FREM3P0C091 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
FREM3P0C091 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms