Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD48P09326 AL645728.1-201ENST00000366221 2101 ntBASIC17.72■□□□□ 0.43
CD48P09326 AL118508.1-201ENST00000613502 2345 ntBASIC17.72■□□□□ 0.43
CD48P09326 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD48P09326 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD48P09326 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD48P09326 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CD48P09326 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CD48P09326 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD48P09326 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD48P09326 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD48P09326 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.72■□□□□ 0.43
CD48P09326 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD48P09326 AP002414.1-201ENST00000391405 1147 ntBASIC17.72■□□□□ 0.43
CD48P09326 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.72■□□□□ 0.43
CD48P09326 SAPCD2P3-201ENST00000455031 850 ntBASIC17.72■□□□□ 0.43
CD48P09326 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD48P09326 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.72■□□□□ 0.43
CD48P09326 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.72■□□□□ 0.43
CD48P09326 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.72■□□□□ 0.43
CD48P09326 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.72■□□□□ 0.43
CD48P09326 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CD48P09326 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.72■□□□□ 0.43
CD48P09326 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CD48P09326 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CD48P09326 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CD48P09326 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CD48P09326 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD48P09326 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD48P09326 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD48P09326 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
CD48P09326 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD48P09326 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD48P09326 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CD48P09326 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CD48P09326 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CD48P09326 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD48P09326 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD48P09326 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CD48P09326 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CD48P09326 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD48P09326 AC243591.1-201ENST00000452967 1364 ntBASIC17.71■□□□□ 0.43
CD48P09326 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD48P09326 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD48P09326 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CD48P09326 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD48P09326 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CD48P09326 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CD48P09326 AC021087.4-201ENST00000563761 564 ntBASIC17.71■□□□□ 0.43
CD48P09326 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.71■□□□□ 0.43
CD48P09326 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.71■□□□□ 0.43
CD48P09326 AC025062.2-201ENST00000605477 670 ntBASIC17.71■□□□□ 0.43
CD48P09326 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CD48P09326 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD48P09326 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD48P09326 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.71■□□□□ 0.43
CD48P09326 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
CD48P09326 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.71■□□□□ 0.43
CD48P09326 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD48P09326 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.71■□□□□ 0.43
CD48P09326 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CD48P09326 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.71■□□□□ 0.43
CD48P09326 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
CD48P09326 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
CD48P09326 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CD48P09326 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.71■□□□□ 0.42
CD48P09326 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.71■□□□□ 0.42
CD48P09326 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
CD48P09326 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD48P09326 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CD48P09326 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
CD48P09326 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CD48P09326 DUSP5P1-201ENST00000441325 1139 ntBASIC17.7■□□□□ 0.42
CD48P09326 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.7■□□□□ 0.42
CD48P09326 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
CD48P09326 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.7■□□□□ 0.42
CD48P09326 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CD48P09326 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.7■□□□□ 0.42
CD48P09326 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
CD48P09326 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD48P09326 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD48P09326 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CD48P09326 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CD48P09326 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD48P09326 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD48P09326 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CD48P09326 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CD48P09326 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.7■□□□□ 0.42
CD48P09326 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD48P09326 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD48P09326 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD48P09326 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD48P09326 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD48P09326 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CD48P09326 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CD48P09326 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
CD48P09326 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.69■□□□□ 0.42
CD48P09326 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.69■□□□□ 0.42
CD48P09326 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.69■□□□□ 0.42
CD48P09326 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms