Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
THBS1P07996 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
THBS1P07996 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
THBS1P07996 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.76■□□□□ 0.11
THBS1P07996 FAAHP1-202ENST00000446499 1238 ntBASIC15.76■□□□□ 0.11
THBS1P07996 AC132008.2-207ENST00000454517 770 ntBASIC15.76■□□□□ 0.11
THBS1P07996 UNC93B7-201ENST00000509439 705 ntBASIC15.76■□□□□ 0.11
THBS1P07996 PRELID1P1-202ENST00000567272 903 ntBASIC15.76■□□□□ 0.11
THBS1P07996 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.76■□□□□ 0.11
THBS1P07996 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.76■□□□□ 0.11
THBS1P07996 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC15.76■□□□□ 0.11
THBS1P07996 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
THBS1P07996 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.76■□□□□ 0.11
THBS1P07996 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
THBS1P07996 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
THBS1P07996 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
THBS1P07996 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
THBS1P07996 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.76■□□□□ 0.11
THBS1P07996 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
THBS1P07996 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.76■□□□□ 0.11
THBS1P07996 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
THBS1P07996 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
THBS1P07996 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
THBS1P07996 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
THBS1P07996 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
THBS1P07996 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
THBS1P07996 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
THBS1P07996 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
THBS1P07996 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
THBS1P07996 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.75■□□□□ 0.11
THBS1P07996 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
THBS1P07996 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
THBS1P07996 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC15.75■□□□□ 0.11
THBS1P07996 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.75■□□□□ 0.11
THBS1P07996 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.75■□□□□ 0.11
THBS1P07996 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
THBS1P07996 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
THBS1P07996 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
THBS1P07996 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
THBS1P07996 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
THBS1P07996 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.75■□□□□ 0.11
THBS1P07996 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.75■□□□□ 0.11
THBS1P07996 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.75■□□□□ 0.11
THBS1P07996 DUX4L17-201ENST00000557360 1267 ntBASIC15.75■□□□□ 0.11
THBS1P07996 NIFKP4-201ENST00000567275 1192 ntBASIC15.75■□□□□ 0.11
THBS1P07996 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
THBS1P07996 AL353135.1-201ENST00000606729 504 ntBASIC15.75■□□□□ 0.11
THBS1P07996 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
THBS1P07996 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.75■□□□□ 0.11
THBS1P07996 AL139288.1-201ENST00000623748 933 ntBASIC15.75■□□□□ 0.11
THBS1P07996 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.75■□□□□ 0.11
THBS1P07996 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
THBS1P07996 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.75■□□□□ 0.11
THBS1P07996 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
THBS1P07996 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.75■□□□□ 0.11
THBS1P07996 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
THBS1P07996 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
THBS1P07996 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
THBS1P07996 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
THBS1P07996 RNF216P1-203ENST00000404404 2427 ntBASIC15.75■□□□□ 0.11
THBS1P07996 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.75■□□□□ 0.11
THBS1P07996 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
THBS1P07996 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
THBS1P07996 AL021920.2-201ENST00000624828 1351 ntBASIC15.75■□□□□ 0.11
THBS1P07996 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
THBS1P07996 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
THBS1P07996 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.74■□□□□ 0.11
THBS1P07996 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
THBS1P07996 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
THBS1P07996 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
THBS1P07996 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
THBS1P07996 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
THBS1P07996 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
THBS1P07996 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
THBS1P07996 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
THBS1P07996 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.74■□□□□ 0.11
THBS1P07996 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.74■□□□□ 0.11
THBS1P07996 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
THBS1P07996 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
THBS1P07996 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
THBS1P07996 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.74■□□□□ 0.11
THBS1P07996 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
THBS1P07996 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
THBS1P07996 FOSL1P1-201ENST00000511041 816 ntBASIC15.74■□□□□ 0.11
THBS1P07996 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.74■□□□□ 0.11
THBS1P07996 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
THBS1P07996 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
THBS1P07996 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.74■□□□□ 0.11
THBS1P07996 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
THBS1P07996 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.74■□□□□ 0.11
THBS1P07996 AL022326.1-202ENST00000641533 845 ntBASIC15.74■□□□□ 0.11
THBS1P07996 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.74■□□□□ 0.11
THBS1P07996 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
THBS1P07996 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
THBS1P07996 NCF1C-201ENST00000438382 1427 ntBASIC15.74■□□□□ 0.11
THBS1P07996 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
THBS1P07996 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
THBS1P07996 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
THBS1P07996 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
THBS1P07996 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms