Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRAP04437 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.07□□□□□ -0.32
TCRAP04437 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRAP04437 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
TCRAP04437 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.07□□□□□ -0.32
TCRAP04437 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRAP04437 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TCRAP04437 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRAP04437 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.07□□□□□ -0.32
TCRAP04437 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TCRAP04437 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TCRAP04437 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TCRAP04437 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TCRAP04437 AC092364.2-201ENST00000596710 2692 ntBASIC13.06□□□□□ -0.32
TCRAP04437 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
TCRAP04437 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC13.06□□□□□ -0.32
TCRAP04437 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TCRAP04437 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TCRAP04437 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
TCRAP04437 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
TCRAP04437 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TCRAP04437 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TCRAP04437 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TCRAP04437 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TCRAP04437 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TCRAP04437 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TCRAP04437 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TCRAP04437 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TCRAP04437 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TCRAP04437 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC13.06□□□□□ -0.32
TCRAP04437 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC13.06□□□□□ -0.32
TCRAP04437 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC13.06□□□□□ -0.32
TCRAP04437 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TCRAP04437 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC13.06□□□□□ -0.32
TCRAP04437 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
TCRAP04437 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC13.06□□□□□ -0.32
TCRAP04437 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC13.06□□□□□ -0.32
TCRAP04437 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC13.06□□□□□ -0.32
TCRAP04437 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC13.06□□□□□ -0.32
TCRAP04437 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC13.06□□□□□ -0.32
TCRAP04437 CLN6-221ENST00000637494 765 ntTSL 5 BASIC13.06□□□□□ -0.32
TCRAP04437 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC13.06□□□□□ -0.32
TCRAP04437 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TCRAP04437 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TCRAP04437 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TCRAP04437 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TCRAP04437 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TCRAP04437 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TCRAP04437 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TCRAP04437 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
TCRAP04437 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TCRAP04437 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.06□□□□□ -0.32
TCRAP04437 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TCRAP04437 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
TCRAP04437 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
TCRAP04437 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13.06□□□□□ -0.32
TCRAP04437 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TCRAP04437 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
TCRAP04437 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TCRAP04437 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
TCRAP04437 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
TCRAP04437 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRAP04437 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRAP04437 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC13.05□□□□□ -0.32
TCRAP04437 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TCRAP04437 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.05□□□□□ -0.32
TCRAP04437 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TCRAP04437 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TCRAP04437 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRAP04437 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRAP04437 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
TCRAP04437 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRAP04437 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.05□□□□□ -0.32
TCRAP04437 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRAP04437 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
TCRAP04437 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRAP04437 FRMD8P1-201ENST00000440433 1524 ntBASIC13.05□□□□□ -0.32
TCRAP04437 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
TCRAP04437 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TCRAP04437 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
TCRAP04437 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRAP04437 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.05□□□□□ -0.32
TCRAP04437 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRAP04437 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRAP04437 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TCRAP04437 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRAP04437 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
TCRAP04437 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC13.05□□□□□ -0.32
TCRAP04437 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC13.05□□□□□ -0.32
TCRAP04437 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRAP04437 ZNF444P1-201ENST00000559497 298 ntBASIC13.05□□□□□ -0.32
TCRAP04437 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TCRAP04437 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC13.05□□□□□ -0.32
TCRAP04437 GPR32P1-201ENST00000601788 811 ntBASIC13.05□□□□□ -0.32
TCRAP04437 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TCRAP04437 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.05□□□□□ -0.32
TCRAP04437 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRAP04437 AC132872.4-202ENST00000622924 2756 ntBASIC13.05□□□□□ -0.32
TCRAP04437 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.05□□□□□ -0.32
TCRAP04437 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms