Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ABCA1O95477 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ABCA1O95477 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ABCA1O95477 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.36□□□□□ -0.11
ABCA1O95477 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.36□□□□□ -0.11
ABCA1O95477 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.36□□□□□ -0.11
ABCA1O95477 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.36□□□□□ -0.11
ABCA1O95477 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.36□□□□□ -0.11
ABCA1O95477 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ABCA1O95477 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.36□□□□□ -0.11
ABCA1O95477 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.36□□□□□ -0.11
ABCA1O95477 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.36□□□□□ -0.11
ABCA1O95477 AC087641.1-201ENST00000557561 1021 ntBASIC14.36□□□□□ -0.11
ABCA1O95477 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.36□□□□□ -0.11
ABCA1O95477 AL353135.1-201ENST00000606729 504 ntBASIC14.36□□□□□ -0.11
ABCA1O95477 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ABCA1O95477 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ABCA1O95477 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.36□□□□□ -0.11
ABCA1O95477 AC100803.2-201ENST00000562459 1963 ntBASIC14.36□□□□□ -0.11
ABCA1O95477 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
ABCA1O95477 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ABCA1O95477 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ABCA1O95477 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ABCA1O95477 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ABCA1O95477 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ABCA1O95477 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
ABCA1O95477 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ABCA1O95477 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ABCA1O95477 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ABCA1O95477 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ABCA1O95477 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ABCA1O95477 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ABCA1O95477 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.36□□□□□ -0.11
ABCA1O95477 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.36□□□□□ -0.11
ABCA1O95477 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
ABCA1O95477 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
ABCA1O95477 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.36□□□□□ -0.11
ABCA1O95477 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.36□□□□□ -0.11
ABCA1O95477 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.36□□□□□ -0.11
ABCA1O95477 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.36□□□□□ -0.11
ABCA1O95477 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ABCA1O95477 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ABCA1O95477 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ABCA1O95477 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ABCA1O95477 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ABCA1O95477 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ABCA1O95477 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ABCA1O95477 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ABCA1O95477 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ABCA1O95477 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.35□□□□□ -0.11
ABCA1O95477 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ABCA1O95477 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ABCA1O95477 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.35□□□□□ -0.11
ABCA1O95477 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ABCA1O95477 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ABCA1O95477 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ABCA1O95477 AL627223.1-201ENST00000416693 442 ntBASIC14.35□□□□□ -0.11
ABCA1O95477 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.35□□□□□ -0.11
ABCA1O95477 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
ABCA1O95477 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.35□□□□□ -0.11
ABCA1O95477 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
ABCA1O95477 GGTLC5P-201ENST00000617623 998 ntBASIC14.35□□□□□ -0.11
ABCA1O95477 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
ABCA1O95477 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
ABCA1O95477 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ABCA1O95477 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ABCA1O95477 PCDHB18P-201ENST00000524813 2368 ntBASIC14.35□□□□□ -0.11
ABCA1O95477 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ABCA1O95477 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.35□□□□□ -0.11
ABCA1O95477 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ABCA1O95477 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ABCA1O95477 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ABCA1O95477 AC097637.2-201ENST00000624096 1997 ntBASIC14.35□□□□□ -0.11
ABCA1O95477 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ABCA1O95477 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
ABCA1O95477 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.35□□□□□ -0.11
ABCA1O95477 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ABCA1O95477 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ABCA1O95477 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ABCA1O95477 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ABCA1O95477 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.35□□□□□ -0.11
ABCA1O95477 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.35□□□□□ -0.11
ABCA1O95477 HLA-J-202ENST00000469281 1241 ntBASIC14.35□□□□□ -0.11
ABCA1O95477 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.35□□□□□ -0.11
ABCA1O95477 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.35□□□□□ -0.11
ABCA1O95477 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.35□□□□□ -0.11
ABCA1O95477 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ABCA1O95477 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.35□□□□□ -0.11
ABCA1O95477 AC004835.2-201ENST00000603762 682 ntBASIC14.35□□□□□ -0.11
ABCA1O95477 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
ABCA1O95477 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC14.35□□□□□ -0.11
ABCA1O95477 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ABCA1O95477 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ABCA1O95477 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ABCA1O95477 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ABCA1O95477 NOC2LP1-202ENST00000452600 2235 ntBASIC14.35□□□□□ -0.11
ABCA1O95477 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ABCA1O95477 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
ABCA1O95477 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.35□□□□□ -0.11
ABCA1O95477 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms