Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16.44■□□□□ 0.22
GFRA3O60609 SRD5A3P1-201ENST00000603021 949 ntBASIC16.44■□□□□ 0.22
GFRA3O60609 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.44■□□□□ 0.22
GFRA3O60609 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.44■□□□□ 0.22
GFRA3O60609 AC007952.6-201ENST00000573168 2673 ntBASIC16.44■□□□□ 0.22
GFRA3O60609 AC003957.1-201ENST00000625108 2673 ntBASIC16.44■□□□□ 0.22
GFRA3O60609 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GFRA3O60609 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GFRA3O60609 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GFRA3O60609 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
GFRA3O60609 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.44■□□□□ 0.22
GFRA3O60609 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
GFRA3O60609 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
GFRA3O60609 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GFRA3O60609 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GFRA3O60609 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.43■□□□□ 0.22
GFRA3O60609 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GFRA3O60609 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GFRA3O60609 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.43■□□□□ 0.22
GFRA3O60609 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GFRA3O60609 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.43■□□□□ 0.22
GFRA3O60609 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GFRA3O60609 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GFRA3O60609 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GFRA3O60609 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GFRA3O60609 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GFRA3O60609 MTATP6P19-201ENST00000413797 659 ntBASIC16.43■□□□□ 0.22
GFRA3O60609 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.43■□□□□ 0.22
GFRA3O60609 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC16.43■□□□□ 0.22
GFRA3O60609 CALR4P-201ENST00000431943 946 ntBASIC16.43■□□□□ 0.22
GFRA3O60609 USP32P1-208ENST00000506594 1164 ntBASIC16.43■□□□□ 0.22
GFRA3O60609 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.43■□□□□ 0.22
GFRA3O60609 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.43■□□□□ 0.22
GFRA3O60609 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.43■□□□□ 0.22
GFRA3O60609 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.43■□□□□ 0.22
GFRA3O60609 AL390728.6-201ENST00000566446 1246 ntBASIC16.43■□□□□ 0.22
GFRA3O60609 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GFRA3O60609 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
GFRA3O60609 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
GFRA3O60609 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.43■□□□□ 0.22
GFRA3O60609 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
GFRA3O60609 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
GFRA3O60609 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
GFRA3O60609 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
GFRA3O60609 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.42■□□□□ 0.22
GFRA3O60609 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GFRA3O60609 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GFRA3O60609 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
GFRA3O60609 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GFRA3O60609 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.42■□□□□ 0.22
GFRA3O60609 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.42■□□□□ 0.22
GFRA3O60609 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GFRA3O60609 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
GFRA3O60609 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GFRA3O60609 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GFRA3O60609 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
GFRA3O60609 AC114501.2-201ENST00000439631 535 ntBASIC16.42■□□□□ 0.22
GFRA3O60609 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.42■□□□□ 0.22
GFRA3O60609 AC023310.3-201ENST00000557027 670 ntBASIC16.42■□□□□ 0.22
GFRA3O60609 AC100756.1-201ENST00000562736 682 ntBASIC16.42■□□□□ 0.22
GFRA3O60609 AC138749.3-201ENST00000567691 622 ntBASIC16.42■□□□□ 0.22
GFRA3O60609 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
GFRA3O60609 AC116165.1-201ENST00000611806 668 ntBASIC16.42■□□□□ 0.22
GFRA3O60609 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.42■□□□□ 0.22
GFRA3O60609 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
GFRA3O60609 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
GFRA3O60609 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
GFRA3O60609 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
GFRA3O60609 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GFRA3O60609 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GFRA3O60609 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
GFRA3O60609 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
GFRA3O60609 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
GFRA3O60609 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.42■□□□□ 0.22
GFRA3O60609 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
GFRA3O60609 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
GFRA3O60609 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.41■□□□□ 0.22
GFRA3O60609 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.41■□□□□ 0.22
GFRA3O60609 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.41■□□□□ 0.22
GFRA3O60609 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.41■□□□□ 0.22
GFRA3O60609 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.41■□□□□ 0.22
GFRA3O60609 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
GFRA3O60609 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
GFRA3O60609 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.41■□□□□ 0.22
GFRA3O60609 NUS1P3-201ENST00000423502 862 ntBASIC16.41■□□□□ 0.22
GFRA3O60609 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.41■□□□□ 0.22
GFRA3O60609 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
GFRA3O60609 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC16.41■□□□□ 0.22
GFRA3O60609 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.41■□□□□ 0.22
GFRA3O60609 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.41■□□□□ 0.22
GFRA3O60609 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
GFRA3O60609 KRT18P34-201ENST00000488218 1270 ntBASIC16.41■□□□□ 0.22
GFRA3O60609 HNRNPUP1-201ENST00000554987 333 ntBASIC16.41■□□□□ 0.22
GFRA3O60609 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.41■□□□□ 0.22
GFRA3O60609 MIR3909-201ENST00000579518 119 ntBASIC16.41■□□□□ 0.22
GFRA3O60609 MIR4706-201ENST00000582134 82 ntBASIC16.41■□□□□ 0.22
GFRA3O60609 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC16.41■□□□□ 0.22
GFRA3O60609 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.41■□□□□ 0.22
GFRA3O60609 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.41■□□□□ 0.22
GFRA3O60609 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms