Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
PRKNO60260 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PRKNO60260 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
PRKNO60260 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PRKNO60260 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
PRKNO60260 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PRKNO60260 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.93■□□□□ 0.14
PRKNO60260 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PRKNO60260 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PRKNO60260 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
PRKNO60260 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PRKNO60260 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
PRKNO60260 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PRKNO60260 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PRKNO60260 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PRKNO60260 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRKNO60260 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.92■□□□□ 0.14
PRKNO60260 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PRKNO60260 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRKNO60260 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
PRKNO60260 PI4KAP1-204ENST00000612579 1703 ntBASIC15.92■□□□□ 0.14
PRKNO60260 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PRKNO60260 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.92■□□□□ 0.14
PRKNO60260 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRKNO60260 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRKNO60260 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.92■□□□□ 0.14
PRKNO60260 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRKNO60260 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
PRKNO60260 AP002414.1-201ENST00000391405 1147 ntBASIC15.92■□□□□ 0.14
PRKNO60260 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PRKNO60260 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
PRKNO60260 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PRKNO60260 PMS2P1-201ENST00000431037 1228 ntBASIC15.92■□□□□ 0.14
PRKNO60260 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PRKNO60260 KRT18P58-201ENST00000527480 1120 ntBASIC15.92■□□□□ 0.14
PRKNO60260 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.92■□□□□ 0.14
PRKNO60260 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
PRKNO60260 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.92■□□□□ 0.14
PRKNO60260 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.92■□□□□ 0.14
PRKNO60260 TERC-201ENST00000602385 541 ntBASIC15.92■□□□□ 0.14
PRKNO60260 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.92■□□□□ 0.14
PRKNO60260 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PRKNO60260 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
PRKNO60260 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRKNO60260 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRKNO60260 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PRKNO60260 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PRKNO60260 AC016396.2-201ENST00000562575 1417 ntBASIC15.92■□□□□ 0.14
PRKNO60260 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PRKNO60260 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PRKNO60260 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PRKNO60260 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRKNO60260 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRKNO60260 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRKNO60260 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PRKNO60260 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRKNO60260 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRKNO60260 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRKNO60260 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PRKNO60260 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
PRKNO60260 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRKNO60260 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRKNO60260 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
PRKNO60260 AC060834.1-201ENST00000443027 2032 ntBASIC15.91■□□□□ 0.14
PRKNO60260 AC092068.3-201ENST00000587894 2016 ntBASIC15.91■□□□□ 0.14
PRKNO60260 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.91■□□□□ 0.14
PRKNO60260 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.91■□□□□ 0.14
PRKNO60260 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.91■□□□□ 0.14
PRKNO60260 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.91■□□□□ 0.14
PRKNO60260 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRKNO60260 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.91■□□□□ 0.14
PRKNO60260 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.91■□□□□ 0.14
PRKNO60260 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRKNO60260 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PRKNO60260 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRKNO60260 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
PRKNO60260 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRKNO60260 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRKNO60260 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PRKNO60260 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRKNO60260 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRKNO60260 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRKNO60260 AC022211.2-201ENST00000585075 2527 ntBASIC15.91■□□□□ 0.14
PRKNO60260 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRKNO60260 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PRKNO60260 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PRKNO60260 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PRKNO60260 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRKNO60260 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRKNO60260 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC15.9■□□□□ 0.14
PRKNO60260 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.9■□□□□ 0.14
PRKNO60260 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.9■□□□□ 0.14
PRKNO60260 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRKNO60260 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PRKNO60260 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRKNO60260 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRKNO60260 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
PRKNO60260 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PRKNO60260 MED15P5-201ENST00000423150 992 ntBASIC15.9■□□□□ 0.14
PRKNO60260 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms