Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.52■□□□□ 0.56
EXTL3O43909 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
EXTL3O43909 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
EXTL3O43909 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
EXTL3O43909 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
EXTL3O43909 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
EXTL3O43909 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
EXTL3O43909 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.52■□□□□ 0.56
EXTL3O43909 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
EXTL3O43909 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.52■□□□□ 0.56
EXTL3O43909 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
EXTL3O43909 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.52■□□□□ 0.56
EXTL3O43909 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
EXTL3O43909 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.52■□□□□ 0.56
EXTL3O43909 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.52■□□□□ 0.56
EXTL3O43909 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.52■□□□□ 0.56
EXTL3O43909 AC034105.1-201ENST00000563488 319 ntBASIC18.52■□□□□ 0.56
EXTL3O43909 MIR4751-201ENST00000578027 74 ntBASIC18.52■□□□□ 0.56
EXTL3O43909 TCAP-202ENST00000578283 583 ntTSL 5 BASIC18.52■□□□□ 0.56
EXTL3O43909 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
EXTL3O43909 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
EXTL3O43909 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
EXTL3O43909 AC010654.1-201ENST00000615722 808 ntBASIC18.52■□□□□ 0.56
EXTL3O43909 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
EXTL3O43909 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
EXTL3O43909 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.52■□□□□ 0.55
EXTL3O43909 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
EXTL3O43909 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
EXTL3O43909 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
EXTL3O43909 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
EXTL3O43909 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
EXTL3O43909 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
EXTL3O43909 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.52■□□□□ 0.55
EXTL3O43909 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
EXTL3O43909 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
EXTL3O43909 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
EXTL3O43909 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.51■□□□□ 0.55
EXTL3O43909 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.51■□□□□ 0.55
EXTL3O43909 AC080080.1-201ENST00000625121 2420 ntBASIC18.51■□□□□ 0.55
EXTL3O43909 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
EXTL3O43909 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
EXTL3O43909 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
EXTL3O43909 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
EXTL3O43909 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
EXTL3O43909 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
EXTL3O43909 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
EXTL3O43909 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
EXTL3O43909 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
EXTL3O43909 VN2R19P-201ENST00000442399 1052 ntBASIC18.51■□□□□ 0.55
EXTL3O43909 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
EXTL3O43909 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
EXTL3O43909 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
EXTL3O43909 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
EXTL3O43909 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
EXTL3O43909 REXO1L3P-201ENST00000622202 1288 ntBASIC18.51■□□□□ 0.55
EXTL3O43909 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
EXTL3O43909 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
EXTL3O43909 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
EXTL3O43909 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
EXTL3O43909 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.51■□□□□ 0.55
EXTL3O43909 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
EXTL3O43909 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
EXTL3O43909 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.51■□□□□ 0.55
EXTL3O43909 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
EXTL3O43909 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
EXTL3O43909 TUBB8P12-201ENST00000308911 1335 ntBASIC18.5■□□□□ 0.55
EXTL3O43909 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.5■□□□□ 0.55
EXTL3O43909 TUBB7P-202ENST00000428444 1305 ntBASIC18.5■□□□□ 0.55
EXTL3O43909 TUBB8P7-204ENST00000567960 1332 ntBASIC18.5■□□□□ 0.55
EXTL3O43909 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
EXTL3O43909 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
EXTL3O43909 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
EXTL3O43909 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.5■□□□□ 0.55
EXTL3O43909 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.5■□□□□ 0.55
EXTL3O43909 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
EXTL3O43909 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
EXTL3O43909 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
EXTL3O43909 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.5■□□□□ 0.55
EXTL3O43909 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.5■□□□□ 0.55
EXTL3O43909 POLD2P1-201ENST00000511220 997 ntBASIC18.5■□□□□ 0.55
EXTL3O43909 KRT18P58-201ENST00000527480 1120 ntBASIC18.5■□□□□ 0.55
EXTL3O43909 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
EXTL3O43909 AC106730.1-201ENST00000566722 1090 ntBASIC18.5■□□□□ 0.55
EXTL3O43909 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
EXTL3O43909 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
EXTL3O43909 ZNF259P1-201ENST00000407656 1365 ntBASIC18.5■□□□□ 0.55
EXTL3O43909 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.5■□□□□ 0.55
EXTL3O43909 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
EXTL3O43909 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
EXTL3O43909 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
EXTL3O43909 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
EXTL3O43909 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
EXTL3O43909 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.5■□□□□ 0.55
EXTL3O43909 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.5■□□□□ 0.55
EXTL3O43909 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
EXTL3O43909 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
EXTL3O43909 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
EXTL3O43909 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
EXTL3O43909 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.5■□□□□ 0.55
EXTL3O43909 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms