Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 RPS2P1-201ENST00000434010 821 ntBASIC15.25■□□□□ 0.03
TRAF3IP2O43734 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 RNPS1P1-201ENST00000507437 918 ntBASIC15.25■□□□□ 0.03
TRAF3IP2O43734 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 AL031008.1-201ENST00000619963 541 ntBASIC15.25■□□□□ 0.03
TRAF3IP2O43734 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.25■□□□□ 0.03
TRAF3IP2O43734 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 AC243591.1-201ENST00000452967 1364 ntBASIC15.24■□□□□ 0.03
TRAF3IP2O43734 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 KRT18P67-201ENST00000432816 1264 ntBASIC15.24■□□□□ 0.03
TRAF3IP2O43734 FAM197Y8-203ENST00000450145 560 ntBASIC15.24■□□□□ 0.03
TRAF3IP2O43734 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 OR7E14P-202ENST00000530490 1290 ntBASIC15.24■□□□□ 0.03
TRAF3IP2O43734 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 DUX4L17-201ENST00000557360 1267 ntBASIC15.24■□□□□ 0.03
TRAF3IP2O43734 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 AC006557.2-201ENST00000592985 1240 ntBASIC15.24■□□□□ 0.03
TRAF3IP2O43734 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 AC005915.1-201ENST00000624912 2018 ntBASIC15.24■□□□□ 0.03
TRAF3IP2O43734 AC105020.1-201ENST00000435356 2205 ntBASIC15.24■□□□□ 0.03
TRAF3IP2O43734 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRAF3IP2O43734 AC009053.2-201ENST00000563701 2365 ntBASIC15.24■□□□□ 0.03
TRAF3IP2O43734 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRAF3IP2O43734 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms