Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC18.25■□□□□ 0.51
TNRC18O15417 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNRC18O15417 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TNRC18O15417 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.25■□□□□ 0.51
TNRC18O15417 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNRC18O15417 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNRC18O15417 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNRC18O15417 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNRC18O15417 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.25■□□□□ 0.51
TNRC18O15417 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TNRC18O15417 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
TNRC18O15417 AC005077.2-201ENST00000449786 690 ntBASIC18.25■□□□□ 0.51
TNRC18O15417 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.25■□□□□ 0.51
TNRC18O15417 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.25■□□□□ 0.51
TNRC18O15417 AC092337.1-201ENST00000568699 1129 ntBASIC18.25■□□□□ 0.51
TNRC18O15417 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TNRC18O15417 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.24■□□□□ 0.51
TNRC18O15417 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TNRC18O15417 ZBTB12BP-201ENST00000314232 1122 ntBASIC18.24■□□□□ 0.51
TNRC18O15417 UFM1-202ENST00000379649 846 ntTSL 4 BASIC18.24■□□□□ 0.51
TNRC18O15417 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.24■□□□□ 0.51
TNRC18O15417 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC18.24■□□□□ 0.51
TNRC18O15417 BX284668.4-201ENST00000453917 508 ntBASIC18.24■□□□□ 0.51
TNRC18O15417 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.24■□□□□ 0.51
TNRC18O15417 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TNRC18O15417 BX276092.7-203ENST00000637198 1536 ntBASIC18.24■□□□□ 0.51
TNRC18O15417 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TNRC18O15417 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TNRC18O15417 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
TNRC18O15417 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TNRC18O15417 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TNRC18O15417 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TNRC18O15417 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TNRC18O15417 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC18.24■□□□□ 0.51
TNRC18O15417 AC068587.3-201ENST00000526613 355 ntBASIC18.24■□□□□ 0.51
TNRC18O15417 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TNRC18O15417 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TNRC18O15417 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TNRC18O15417 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
TNRC18O15417 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TNRC18O15417 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TNRC18O15417 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.24■□□□□ 0.51
TNRC18O15417 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TNRC18O15417 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TNRC18O15417 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TNRC18O15417 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.24■□□□□ 0.51
TNRC18O15417 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.24■□□□□ 0.51
TNRC18O15417 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.24■□□□□ 0.51
TNRC18O15417 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TNRC18O15417 CFL1-214ENST00000534769 758 ntTSL 2 BASIC18.24■□□□□ 0.51
TNRC18O15417 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC18.24■□□□□ 0.51
TNRC18O15417 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.24■□□□□ 0.51
TNRC18O15417 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC18.24■□□□□ 0.51
TNRC18O15417 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TNRC18O15417 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC18.23■□□□□ 0.51
TNRC18O15417 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TNRC18O15417 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TNRC18O15417 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TNRC18O15417 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TNRC18O15417 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.23■□□□□ 0.51
TNRC18O15417 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TNRC18O15417 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.23■□□□□ 0.51
TNRC18O15417 AL162726.2-201ENST00000438986 1017 ntBASIC18.23■□□□□ 0.51
TNRC18O15417 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC18.23■□□□□ 0.51
TNRC18O15417 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.23■□□□□ 0.51
TNRC18O15417 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.23■□□□□ 0.51
TNRC18O15417 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC18.23■□□□□ 0.51
TNRC18O15417 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TNRC18O15417 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TNRC18O15417 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TNRC18O15417 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TNRC18O15417 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
TNRC18O15417 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TNRC18O15417 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TNRC18O15417 MIR1227-201ENST00000408484 88 ntBASIC18.23■□□□□ 0.51
TNRC18O15417 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC18.23■□□□□ 0.51
TNRC18O15417 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC18.23■□□□□ 0.51
TNRC18O15417 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TNRC18O15417 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC18.23■□□□□ 0.51
TNRC18O15417 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TNRC18O15417 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.23■□□□□ 0.51
TNRC18O15417 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TNRC18O15417 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC18.22■□□□□ 0.51
TNRC18O15417 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TNRC18O15417 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNRC18O15417 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNRC18O15417 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TNRC18O15417 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TNRC18O15417 FTH1P14-201ENST00000482930 551 ntBASIC18.22■□□□□ 0.51
TNRC18O15417 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.22■□□□□ 0.51
TNRC18O15417 AP001505.2-201ENST00000616815 443 ntBASIC18.22■□□□□ 0.51
TNRC18O15417 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TNRC18O15417 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
TNRC18O15417 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TNRC18O15417 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.22■□□□□ 0.51
TNRC18O15417 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TNRC18O15417 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNRC18O15417 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNRC18O15417 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TNRC18O15417 HLA-DQB2-229ENST00000411527 1059 ntBASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms