Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC188H7C350 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC188H7C350 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.82■□□□□ 0.44
CCDC188H7C350 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CCDC188H7C350 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CCDC188H7C350 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CCDC188H7C350 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC188H7C350 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
CCDC188H7C350 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC188H7C350 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC188H7C350 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
CCDC188H7C350 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC188H7C350 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC188H7C350 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC188H7C350 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC188H7C350 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC188H7C350 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC188H7C350 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC188H7C350 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC188H7C350 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC188H7C350 AC003669.1-201ENST00000334569 611 ntBASIC17.81■□□□□ 0.44
CCDC188H7C350 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC188H7C350 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.81■□□□□ 0.44
CCDC188H7C350 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC188H7C350 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC188H7C350 BX664615.1-201ENST00000443558 458 ntBASIC17.81■□□□□ 0.44
CCDC188H7C350 VENTXP5-201ENST00000523979 775 ntBASIC17.81■□□□□ 0.44
CCDC188H7C350 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC188H7C350 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC188H7C350 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC188H7C350 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CCDC188H7C350 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC188H7C350 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.81■□□□□ 0.44
CCDC188H7C350 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC188H7C350 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC188H7C350 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC188H7C350 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC188H7C350 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC188H7C350 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CCDC188H7C350 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.81■□□□□ 0.44
CCDC188H7C350 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.81■□□□□ 0.44
CCDC188H7C350 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC188H7C350 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC188H7C350 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC188H7C350 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC188H7C350 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCDC188H7C350 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC188H7C350 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC188H7C350 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC188H7C350 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC188H7C350 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC188H7C350 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CCDC188H7C350 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC188H7C350 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC188H7C350 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC188H7C350 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC188H7C350 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC188H7C350 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC188H7C350 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC188H7C350 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC188H7C350 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC188H7C350 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC188H7C350 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC188H7C350 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.8■□□□□ 0.44
CCDC188H7C350 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.8■□□□□ 0.44
CCDC188H7C350 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC188H7C350 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC188H7C350 HLA-J-202ENST00000469281 1241 ntBASIC17.8■□□□□ 0.44
CCDC188H7C350 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.8■□□□□ 0.44
CCDC188H7C350 AC139887.4-201ENST00000607877 719 ntBASIC17.8■□□□□ 0.44
CCDC188H7C350 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC188H7C350 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC188H7C350 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC188H7C350 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC188H7C350 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC188H7C350 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC188H7C350 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC188H7C350 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC188H7C350 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC188H7C350 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC188H7C350 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.8■□□□□ 0.44
CCDC188H7C350 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CCDC188H7C350 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC188H7C350 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC188H7C350 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCDC188H7C350 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CCDC188H7C350 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC188H7C350 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CCDC188H7C350 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC188H7C350 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC188H7C350 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.79■□□□□ 0.44
CCDC188H7C350 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC188H7C350 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC188H7C350 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC188H7C350 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC188H7C350 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.79■□□□□ 0.44
CCDC188H7C350 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC188H7C350 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC188H7C350 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCDC188H7C350 HOMER2P1-201ENST00000455653 964 ntBASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms