Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AC091167.2-201ENST00000579581 588 ntBASIC15.12■□□□□ 0.01
NPIPB4C9JG80 AC006277.1-201ENST00000624348 1610 ntBASIC15.12■□□□□ 0.01
NPIPB4C9JG80 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPB4C9JG80 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPB4C9JG80 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.12■□□□□ 0.01
NPIPB4C9JG80 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPB4C9JG80 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPB4C9JG80 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPB4C9JG80 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NPIPB4C9JG80 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPB4C9JG80 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPB4C9JG80 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPB4C9JG80 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.12■□□□□ 0.01
NPIPB4C9JG80 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.12■□□□□ 0.01
NPIPB4C9JG80 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.12■□□□□ 0.01
NPIPB4C9JG80 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NPIPB4C9JG80 AC084018.2-201ENST00000613093 2607 ntBASIC15.12■□□□□ 0.01
NPIPB4C9JG80 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 ELK2BP-201ENST00000415014 1224 ntBASIC15.11■□□□□ 0.01
NPIPB4C9JG80 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 KRT18P56-201ENST00000507275 550 ntBASIC15.11■□□□□ 0.01
NPIPB4C9JG80 AC073648.2-201ENST00000510116 352 ntBASIC15.11■□□□□ 0.01
NPIPB4C9JG80 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 AC006538.1-201ENST00000567905 1585 ntBASIC15.11■□□□□ 0.01
NPIPB4C9JG80 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.11■□□□□ 0.01
NPIPB4C9JG80 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.1■□□□□ 0.01
NPIPB4C9JG80 HLA-A-202ENST00000376806 1854 ntBASIC15.1■□□□□ 0.01
NPIPB4C9JG80 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.1■□□□□ 0.01
NPIPB4C9JG80 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB4C9JG80 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB4C9JG80 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB4C9JG80 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.1■□□□□ 0.01
NPIPB4C9JG80 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB4C9JG80 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.1■□□□□ 0.01
NPIPB4C9JG80 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
NPIPB4C9JG80 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.1■□□□□ 0.01
NPIPB4C9JG80 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.1■□□□□ 0.01
NPIPB4C9JG80 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.1■□□□□ 0.01
NPIPB4C9JG80 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.1■□□□□ 0.01
NPIPB4C9JG80 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB4C9JG80 PTCHD3P3-201ENST00000403073 906 ntBASIC15.1■□□□□ 0.01
NPIPB4C9JG80 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.1■□□□□ 0.01
NPIPB4C9JG80 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
NPIPB4C9JG80 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.1■□□□□ 0.01
NPIPB4C9JG80 GGTLC5P-201ENST00000617623 998 ntBASIC15.1■□□□□ 0.01
NPIPB4C9JG80 REXO1L3P-201ENST00000622202 1288 ntBASIC15.1■□□□□ 0.01
NPIPB4C9JG80 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.1■□□□□ 0.01
NPIPB4C9JG80 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB4C9JG80 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB4C9JG80 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB4C9JG80 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB4C9JG80 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.1■□□□□ 0.01
NPIPB4C9JG80 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.1■□□□□ 0.01
NPIPB4C9JG80 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB4C9JG80 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB4C9JG80 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
NPIPB4C9JG80 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB4C9JG80 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.1■□□□□ 0.01
NPIPB4C9JG80 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NPIPB4C9JG80 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms