Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
SHISA3A0PJX4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHISA3A0PJX4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SHISA3A0PJX4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHISA3A0PJX4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHISA3A0PJX4 AL603832.2-201ENST00000566195 2125 ntBASIC14.93□□□□□ -0.02
SHISA3A0PJX4 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
SHISA3A0PJX4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHISA3A0PJX4 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SHISA3A0PJX4 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHISA3A0PJX4 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHISA3A0PJX4 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHISA3A0PJX4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHISA3A0PJX4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHISA3A0PJX4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SHISA3A0PJX4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.93□□□□□ -0.02
SHISA3A0PJX4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.93□□□□□ -0.02
SHISA3A0PJX4 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.93□□□□□ -0.02
SHISA3A0PJX4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.93□□□□□ -0.02
SHISA3A0PJX4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.93□□□□□ -0.02
SHISA3A0PJX4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC14.93□□□□□ -0.02
SHISA3A0PJX4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.93□□□□□ -0.02
SHISA3A0PJX4 MIR4785-201ENST00000585005 73 ntBASIC14.93□□□□□ -0.02
SHISA3A0PJX4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
SHISA3A0PJX4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHISA3A0PJX4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
SHISA3A0PJX4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
SHISA3A0PJX4 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.93□□□□□ -0.02
SHISA3A0PJX4 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHISA3A0PJX4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHISA3A0PJX4 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHISA3A0PJX4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHISA3A0PJX4 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
SHISA3A0PJX4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHISA3A0PJX4 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHISA3A0PJX4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHISA3A0PJX4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHISA3A0PJX4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.93□□□□□ -0.02
SHISA3A0PJX4 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SHISA3A0PJX4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.92□□□□□ -0.02
SHISA3A0PJX4 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 AL136379.1-201ENST00000623471 2642 ntBASIC14.92□□□□□ -0.02
SHISA3A0PJX4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.92□□□□□ -0.02
SHISA3A0PJX4 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 AC008550.1-201ENST00000511500 884 ntBASIC14.92□□□□□ -0.02
SHISA3A0PJX4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 STK25P1-201ENST00000585406 838 ntBASIC14.92□□□□□ -0.02
SHISA3A0PJX4 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 AC006538.1-201ENST00000567905 1585 ntBASIC14.92□□□□□ -0.02
SHISA3A0PJX4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.92□□□□□ -0.02
SHISA3A0PJX4 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms