Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC21.53■■□□□ 1.04
LOC102724428A0A0B4J2F2 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
LOC102724428A0A0B4J2F2 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC21.53■■□□□ 1.04
LOC102724428A0A0B4J2F2 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC21.53■■□□□ 1.04
LOC102724428A0A0B4J2F2 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LOC102724428A0A0B4J2F2 FOXO1B-201ENST00000504678 1527 ntBASIC21.53■■□□□ 1.04
LOC102724428A0A0B4J2F2 LINC00896-202ENST00000609602 2128 ntBASIC21.53■■□□□ 1.04
LOC102724428A0A0B4J2F2 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LOC102724428A0A0B4J2F2 CU639417.3-201ENST00000624240 1404 ntBASIC21.53■■□□□ 1.04
LOC102724428A0A0B4J2F2 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LOC102724428A0A0B4J2F2 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC21.53■■□□□ 1.04
LOC102724428A0A0B4J2F2 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.53■■□□□ 1.04
LOC102724428A0A0B4J2F2 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.53■■□□□ 1.04
LOC102724428A0A0B4J2F2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LOC102724428A0A0B4J2F2 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC21.52■■□□□ 1.04
LOC102724428A0A0B4J2F2 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LOC102724428A0A0B4J2F2 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LOC102724428A0A0B4J2F2 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
LOC102724428A0A0B4J2F2 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
LOC102724428A0A0B4J2F2 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC21.52■■□□□ 1.04
LOC102724428A0A0B4J2F2 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
LOC102724428A0A0B4J2F2 SLC9A3P2-201ENST00000447821 2021 ntBASIC21.52■■□□□ 1.04
LOC102724428A0A0B4J2F2 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LOC102724428A0A0B4J2F2 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC21.52■■□□□ 1.04
LOC102724428A0A0B4J2F2 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC21.52■■□□□ 1.04
LOC102724428A0A0B4J2F2 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC21.52■■□□□ 1.04
LOC102724428A0A0B4J2F2 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
LOC102724428A0A0B4J2F2 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC21.52■■□□□ 1.04
LOC102724428A0A0B4J2F2 AC009407.1-201ENST00000568958 598 ntBASIC21.52■■□□□ 1.04
LOC102724428A0A0B4J2F2 AC021097.1-201ENST00000607902 574 ntBASIC21.52■■□□□ 1.04
LOC102724428A0A0B4J2F2 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LOC102724428A0A0B4J2F2 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC21.52■■□□□ 1.04
LOC102724428A0A0B4J2F2 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC21.52■■□□□ 1.04
LOC102724428A0A0B4J2F2 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC21.52■■□□□ 1.04
LOC102724428A0A0B4J2F2 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
LOC102724428A0A0B4J2F2 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.03
LOC102724428A0A0B4J2F2 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
LOC102724428A0A0B4J2F2 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.52■■□□□ 1.03
LOC102724428A0A0B4J2F2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.03
LOC102724428A0A0B4J2F2 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC21.52■■□□□ 1.03
LOC102724428A0A0B4J2F2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
LOC102724428A0A0B4J2F2 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC21.51■■□□□ 1.03
LOC102724428A0A0B4J2F2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LOC102724428A0A0B4J2F2 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC21.51■■□□□ 1.03
LOC102724428A0A0B4J2F2 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LOC102724428A0A0B4J2F2 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LOC102724428A0A0B4J2F2 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LOC102724428A0A0B4J2F2 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LOC102724428A0A0B4J2F2 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
LOC102724428A0A0B4J2F2 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LOC102724428A0A0B4J2F2 SLC25A1P3-201ENST00000395415 828 ntBASIC21.51■■□□□ 1.03
LOC102724428A0A0B4J2F2 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC21.51■■□□□ 1.03
LOC102724428A0A0B4J2F2 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC21.51■■□□□ 1.03
LOC102724428A0A0B4J2F2 HLA-V-201ENST00000429037 534 ntBASIC21.51■■□□□ 1.03
LOC102724428A0A0B4J2F2 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC21.51■■□□□ 1.03
LOC102724428A0A0B4J2F2 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC21.51■■□□□ 1.03
LOC102724428A0A0B4J2F2 SSH2-210ENST00000582084 560 ntTSL 3 BASIC21.51■■□□□ 1.03
LOC102724428A0A0B4J2F2 CYP2A7P1-201ENST00000595391 815 ntBASIC21.51■■□□□ 1.03
LOC102724428A0A0B4J2F2 MIR6752-201ENST00000618442 71 ntBASIC21.51■■□□□ 1.03
LOC102724428A0A0B4J2F2 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
LOC102724428A0A0B4J2F2 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.51■■□□□ 1.03
LOC102724428A0A0B4J2F2 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC21.51■■□□□ 1.03
LOC102724428A0A0B4J2F2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LOC102724428A0A0B4J2F2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
LOC102724428A0A0B4J2F2 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.51■■□□□ 1.03
LOC102724428A0A0B4J2F2 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
LOC102724428A0A0B4J2F2 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LOC102724428A0A0B4J2F2 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LOC102724428A0A0B4J2F2 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LOC102724428A0A0B4J2F2 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LOC102724428A0A0B4J2F2 BICD1-207ENST00000551848 1962 ntBASIC21.5■■□□□ 1.03
LOC102724428A0A0B4J2F2 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
LOC102724428A0A0B4J2F2 AC004408.2-201ENST00000623613 2777 ntBASIC21.5■■□□□ 1.03
LOC102724428A0A0B4J2F2 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LOC102724428A0A0B4J2F2 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.5■■□□□ 1.03
LOC102724428A0A0B4J2F2 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LOC102724428A0A0B4J2F2 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
LOC102724428A0A0B4J2F2 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LOC102724428A0A0B4J2F2 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC21.5■■□□□ 1.03
LOC102724428A0A0B4J2F2 CDK2AP2P3-201ENST00000422476 372 ntBASIC21.5■■□□□ 1.03
LOC102724428A0A0B4J2F2 U91328.1-201ENST00000437528 223 ntBASIC21.5■■□□□ 1.03
LOC102724428A0A0B4J2F2 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC21.5■■□□□ 1.03
LOC102724428A0A0B4J2F2 CDK4-206ENST00000549606 558 ntTSL 2 BASIC21.5■■□□□ 1.03
LOC102724428A0A0B4J2F2 AC008738.7-201ENST00000609744 511 ntBASIC21.5■■□□□ 1.03
LOC102724428A0A0B4J2F2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.5■■□□□ 1.03
LOC102724428A0A0B4J2F2 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LOC102724428A0A0B4J2F2 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LOC102724428A0A0B4J2F2 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LOC102724428A0A0B4J2F2 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
LOC102724428A0A0B4J2F2 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC21.5■■□□□ 1.03
LOC102724428A0A0B4J2F2 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LOC102724428A0A0B4J2F2 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LOC102724428A0A0B4J2F2 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC21.5■■□□□ 1.03
LOC102724428A0A0B4J2F2 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LOC102724428A0A0B4J2F2 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LOC102724428A0A0B4J2F2 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
LOC102724428A0A0B4J2F2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
LOC102724428A0A0B4J2F2 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LOC102724428A0A0B4J2F2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
LOC102724428A0A0B4J2F2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms